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Job DescriptionP0AGG2
Confidence92.72%DateThu Jan 5 11:29:03 GMT 2012
Rank87Aligned Residues230
% Identity9%Templatec3kg9A_
PDB info PDB header:lyaseChain: A: PDB Molecule:curk; PDBTitle: dehydratase domain from curk module of curacin polyketide synthase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60......... 70.........80.........90........ .100.........110
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Query Sequence  GGQVVGQALYAAKETVPEERLVHSFHSYFLRPGD. . SKKPIIYDVETLRDGNSFSARRVAAIQNG. . . KPIFYMTASFQA
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Template Sequence  ATGYLEIAAAVGKNLLTTGEQVVVSDVTIVRGLVIPETDIKTVQTVISTLENNSYKLEIFSTSEANQWTLHAEGKIFLDS
Template Known Secondary structure  S

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B

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   1006...1010.........1020.........1030.........1040.........1050.........1060.........1070.........1080.....
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  PEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPD
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Template Sequence  TTNTKAKIDLEQYQRECSQVIDIQQHYQQFK. SRGIDYGNSFQGIKQLWK. . . . . . . . . . . . . GQGKALGKIALPEEIAG
Template Known Secondary structure  S











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GGG

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   1091........1100.........1110.........1120. ........1130......... 1140.........1150......
 
   191........200.........210.........220.........230.........240.........250.........260.........270
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Query Sequence  DLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDG
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Template Sequence  QATD. YQLHPALLDAALQILGHAIGNTETDDKAYLPVGID. KLKQYRQTITQVWAIVEIP. . . . . ENTLKGSIKLVDNQG
Template Known Secondary structure  GGGG.
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   1157..1160 .........1170.........1180.........1190..... ....1200.........1210.... .....1220.........
 
   271........280......
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Query Sequence  VLVASTVQEGVMRNHN
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Template Sequence  SLLAEIEGLRVTATTA
Template Known Secondary structure 

S
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   1230.........1240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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