 |
Job Description | P0AGG2 | Confidence | 97.84% | Date | Thu Jan 5 11:29:03 GMT 2012 |
Rank | 53 | Aligned Residues | 91 |
% Identity | 19% | Template | c3ir3B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:3-hydroxyacyl-thioester dehydratase 2; |
PDBTitle: crystal structure of human 3-hydroxyacyl-thioester dehydratase 22 (htd2)
|
Resolution | 1.99 Å |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | S | E | D | L | G | L | R | Q | V | F | G | G | Q | V | V | G | Q | A | L | Y | A | A | K | E | T | V | P | . |
E | E | R | L | V | H | S | F | H | S | Y | F | L | R | P | G | D | S | K | K | P | I | . |
. |
I | Y | D | V | E | T | L | R | D | G | N | S | F | S | A | R | R | V | A | A | I | Q | N | G | K | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|   |
|
|   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|
| . | . |   |   |   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
G | D | V | N | P | L | H | N | T | I | V | H | G | V | L | I | N | G | L | I | S | A | L | L | G | T | K | M | P | G | P | G | C | V | F | L | S | Q | E | I | S | F | P | A | P | L | Y | I | G | E | V | V | L | A | S | A | E | V | K | K | L | K | R | F | I | A | I | I | A | V | S | C | S | V | I | E | S | K | K | T |
Template Known Secondary structure |   |
T |
|
|
| T | T |
|
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| T | T |
|  |  |  |  |  |  |  |  |
|
| S |
|
| B | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | F | Y | M | T | A | S | F | Q | A | P | E | A | G |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
V | M | E | G | W | V | K | V | M | V | P | E | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|