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Job Description | P0AGG2 | Confidence | 98.45% | Date | Thu Jan 5 11:29:03 GMT 2012 |
Rank | 32 | Aligned Residues | 105 |
% Identity | 17% | Template | c3dkzA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:thioesterase superfamily protein; |
PDBTitle: crystal structure of the q7w9w5_borpa protein from2 bordetella parapertussis. northeast structural genomics3 consortium target bpr208c.
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Resolution | 2.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | S | Q | A | L | K | N | L | L | T | L | L | N | L | E | K | I | E | E | G | L | F | R | G | Q | S | E | D | . |
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P | E | E | R | L | V | H | S | F | H | S | Y | F | L | R | P | G | D | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | T | I | P | F | X | Q | L | L | . |
G | V | V | P | E | H | S | G | N | G | T | A | R | T | R | L | P | A | R | A | D | L | V | N | S | R | G | D | I | H | G | G | T | L | X | S | V | L | D | F | T | L | G | A | A | I | R | G | D | T | P | E | V | G | V | A | T | I | D | X | N | T | S | F | X | S | P | . |
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Template Known Secondary structure |   |
S | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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44 | . | . | . | . | . | 50 | . | . | |
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71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | P | I | I | Y | D | V | E | T | L | R | D | G | N | S | F | S | A | R | R | V | A | A | I | Q | N | . |
G | K | P | I | F | Y | M | T | A | S | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | G | D | L | V | I | E | T | R | C | L | R | R | G | A | S | I | A | F | C | E | G | E | I | R | D | S | A | G | E | L | V | A | K | A | T | A | T | F |
Template Known Secondary structure |   |
| S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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