Job Description P0AGG2 Confidence 98.23% Date Thu Jan 5 11:29:03 GMT 2012 Rank 40 Aligned Residues 104 % Identity 13% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																								.
Query SS confidence																				.	.	.	.	.	.																								.
Query Sequence		L	N	L	E	K	I	E	E	G	L	F	R	G	Q	S	E	D	L	.	.	.	.	.	.	G	L	R	Q	V	F	G	G	Q	V	V	G	Q	A	L	Y	A	A	K	E	T	V	P	.	E	E	R	L	V	H	S	F	H	S	Y	F	L	R	P	G	D	S	K	K	P	I	I	Y	D	V	E	T	L	R	D	G
Query Conservation																				.	.	.	.	.	.																								.
Alig confidence																				.	.	.	.	.	.																								.
Template Conservation
Template Sequence		G	T	I	I	E	I	D	K	N	Y	A	K	S	I	L	I	T	T	S	E	X	V	A	D	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	N	K	E	F	S	V	I	I	G	S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D	E
Template Known Secondary structure									T	T										G	G	G	B	S	S	T	T		B	B		T																		S	S												S			B	T	T													S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	S	F	S	A	R	R	V	A	A	I	Q	N	G	K	P	I	F	Y	M	T	A	S	F	Q	A	P	E	A	G	F
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	S	K	K	R	D	V	K	V	V	G	H	V	K	E	I	K	X	F	E	G	T	I	Q	V	V	S	T	D	E	H	I
Template Known Secondary structure		S		S											T	T														S	S		T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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