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12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
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. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
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| . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
L | N | L | E | K | I | E | E | G | L | F | R | G | Q | S | E | . |
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. |
D | L | G | L | R | Q | V | F | G | G | Q | V | V | G | Q | A | L | Y | A | A | K | E | T | V | . |
. |
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P | E | E | R | L | V | H | S | F | H | S | Y | F | L | R | P | G | D | S | K | K | P | I | I | Y | D | V | E | T |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
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|   |
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|   |
Alig confidence |   |
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| . | . | . | . | . |
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| . | . | . | . | . | . |
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Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
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|   |   |   |
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|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
|   |
|   |
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|   |   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
F | S | I | D | A | L | A | K | G | E | I | T | X | R | L | N | V | Q | E | R | H | L | R | P | G | G | T | V | S | G | P | S | X | F | A | L | A | D | V | S | V | Y | A | L | V | L | A | H | L | G | R | E | A | L | A | V | T | T | N | A | S | L | D | F | X | R | K | P | E | S | G | R | D | L | L | G | Q | A | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |
| G | G | G | G | T |
|
| T | T |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
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|  |  |  |  |  |  |  |  |  |
| S |
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| T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
 |  |
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|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
. |
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Query Sequence |   |
L | R | D | G | N | S | F | S | A | R | R | V | A | A | I | Q | N | . |
. |
G | K | P | I | F | Y | M | T | A | S | F | Q | A | P |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|   | . | . |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
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|
| . | . |
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Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|   |
Template Sequence |   |
L | K | L | G | R | T | L | A | V | G | D | I | L | L | F | S | E | G | X | E | A | P | V | A | R | S | T | X | T | Y | S | I | P |
Template Known Secondary structure |   |
 |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
| S |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
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|
|
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  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |