 |
Job Description | P0A8X4 | Confidence | 10.43% | Date | Thu Jan 5 11:08:56 GMT 2012 |
Rank | 54 | Aligned Residues | 35 |
% Identity | 14% | Template | d1kq1a_ |
SCOP info | Sm-like fold
| Sm-like ribonucleoproteins
| Pleiotropic translational regulator Hfq
|
Resolution | 1.55 |
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | D | L | L | V | L | D | G | K | K | V | S | S | . |
. |
S | L | L | R | G | A | D | S | I | E | L | D | N | G | P | H | Q | L | V | F | R |
Query Conservation |   |
  |
|
|
|
|   |
|
|
|   |   |
|   |   | . | . |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
E | V | T | V | F | F | L | N | G | F | Q | M | K | G | V | I | E | E | Y | D | K | Y | V | V | S | L | N | S | Q | G | K | Q | H | L | I | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|