Job Description P0A8X4 Confidence 6.60% Date Thu Jan 5 11:08:56 GMT 2012 Rank 91 Aligned Residues 35 % Identity 17% Template c3hsbB_ PDB info PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer Resolution 2.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		D	V	D	L	L	V	L	D	G	K	K	V	S	S	.	.	S	L	L	R	G	A	D	S	I	E	L	D	N	G	P	H	Q	L	V	F	R
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		Y	V	T	V	F	L	L	N	G	F	Q	L	R	G	Q	V	K	G	F	D	N	F	T	V	L	L	E	S	E	G	K	Q	Q	L	I	Y	K
Template Known Secondary structure								T	T	S												S	S							T	T							G
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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