Return to main results Retrieve Phyre Job Id

Job DescriptionP23874
Confidence35.46%DateWed Jan 25 15:20:44 GMT 2012
Rank4Aligned Residues148
% Identity11%Templatec3attA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rv3168 with atp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200........ .210.........220...... ...230.........240.....
Predicted Secondary structure 


















.







....











....
Query SS confidence 

































.

















. . . .


















. . . .
Query Sequence  PTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLL. LAKELGLNVPDAEIIKAG. . . . NVRALAVERFDRRWNAERT. . . .
Query Conservation      
 
             
       
     .

   

 
    
    ....    
 
 



       ....
Alig confidence 













...
















.

















....


















....
Template Conservation      


       ...          

   
  
     



 
          
    
 
   
           
Template Sequence  QQKLVARVAPAAED. . . VPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTF
Template Known Secondary structure 


GGG...

SSS










SSTTTSS




B


TTTTGGG
Template Predicted Secondary structure 







...


































Template SS confidence 















































































   73......80...... ...90.........100.........110.........120.........130.........140.........
 
   246...250.........260.........270.........280.........290.........300...
Predicted Secondary structure  ......................

















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . .

























































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . VLLRLPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQW
Query Conservation  ......................   
 
 

  
 

     

                          




 


 
Alig confidence  ......................

























































Template Conservation                 
       

 
                                                
    
Template Sequence  GDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHW
Template Known Secondary structure  S
STTTTS
T
SSTGGG





T
Template Predicted Secondary structure 































Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210.........220.........
 
   304.....310.........320.......
Predicted Secondary structure  .........












Query SS confidence  . . . . . . . . .























Query Sequence  . . . . . . . . . LIGATDGHAKNFSVFIQAGGSYRL
Query Conservation  .........



 
 
 

 
 
    
   
Alig confidence  .........










..










Template Conservation            
 


    
..

        
Template Sequence  PDDAAAREPVLLWGDARVGN. . VLYRDFQPVAV
Template Known Secondary structure 
S


SS
SGGG..TT
Template Predicted Secondary structure 














..

Template SS confidence 
































   235....240.........250.... .....260.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions