Job Description P23874 Confidence 99.98% Date Wed Jan 25 15:20:44 GMT 2012 Rank 2 Aligned Residues 242 % Identity 14% Template c3akjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ctka; PDBTitle: crystal structure of a helicobacter pylori proinflammatory kinase ctka Resolution 2.00 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	A	L	L	R	I	G	N	D	W	C	I	P	K	G	I	T	P	T	T	H	I	I	K	L	P	I	G	E	I	R	Q	P	N	A	T	L	D	L	S	Q	S	V	D	N	E	Y	Y	C	L	L	L	A	K	E	L	G	L	N	V	P	D	A	E	I	I	K	A	G	N	V	R	A	L	A	V	E	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	I	S	L	F	Y	N	N	E	L	Y	.	.	.	.	.	.	.	.	.	.	.	M	V	K	F	P	.	.	.	.	.	.	.	.	.	.	.	.	P	T	N	G	C	F	S	E	Y	V	A	C	H	I	V	N	S	L	G	L	K	V	Q	E	T	L	L	G	T	Y	K	N	K	I	V	V	A	C	K	D
Template Known Secondary structure									T	T				.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.																		T	T			B									T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		F	D	R	R	W	N	A	E	R	T	V	L	L	R	L	P	Q	E	D	M	C	Q	T	F	G	L	P	S	S	V	K	Y	E	S	D	G	G	P	G	I	A	R	I	M	A	F	L	M	G	.	.	S	S	E	A	L	K	D	R	Y	D	F	M	K	F	Q	V	F	Q	W	L	I	G	A	T	D	G	H	A	K
Query Conservation																																																			.	.
Alig confidence									.	.	.	.	.	.																						.	.	.	.												.	.
Template Conservation									.	.	.	.	.	.																						.	.	.	.
Template Sequence		F	T	T	H	Q	Y	E	.	.	.	.	.	.	L	V	D	F	L	S	L	K	N	T	M	I	E	L	E	K	S	G	K	D	T	.	.	.	.	N	L	N	D	V	L	Y	A	I	D	N	Q	H	F	I	E	P	K	V	L	K	C	F	F	W	D	M	F	V	A	D	T	L	L	G	N	F	D	R	H	N	G
Template Known Secondary structure		S	T	T	T	T			.	.	.	.	.	.									T	T		T	T		S	S		T	T			.	.	.	.	B												S	S	S																				T		S				T	T
Template Predicted Secondary structure									.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																									.	.	.	.
Query SS confidence											.																									.	.	.	.
Query Sequence		N	F	S	V	F	I	Q	A	G	.	G	S	Y	R	L	T	P	F	Y	D	I	I	S	A	F	P	V	L	G	G	T	G	I	H	.	.	.	.	I	S	D	L	K	L	A	M	G	L	N	A	S	K	G	K	K	T	A	I	D	K	I	Y	P	R	H	F	L	A	T	A	K	V	L	R	F	P	E	V	Q	M
Query Conservation											.																									.	.	.	.
Alig confidence											.																									.	.	.	.																																						.	.
Template Conservation																																																																													.	.
Template Sequence		N	W	G	F	L	R	A	S	N	S	K	E	Y	Q	I	A	P	I	F	D	C	G	S	C	L	Y	P	Q	A	D	D	V	V	C	Q	K	V	L	S	N	I	D	E	L	N	A	R	I	Y	N	F	P	Q	S	I	L	K	D	D	N	D	K	K	I	N	Y	Y	D	F	L	T	Q	T	N	N	.	.	K	D	C
Template Known Secondary structure		S	S						T	T	S	S							B				T	T	S	S		T	T											S											T	S	S			S		B		T	T	S		B								T	T				.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.
		389	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		H	E	I	L	S	D	F	A	R	M	I	.	P	A	A	L	D	N	V	K	T	S	L	P	T	D	F	P	E	N	V	V	T	A	V	E	S	N	V	L	R	L	H	G	R	L
Query Conservation													.
Alig confidence													.													.
Template Conservation																										.
Template Sequence		L	D	A	L	L	R	I	Y	P	R	I	D	M	N	K	I	H	S	I	I	D	N	T	P	.	F	M	S	E	I	H	K	E	F	L	H	T	M	L	D	E	R	K	S	K	I
Template Known Secondary structure									G	G	G												T		T	.	T																				T
Template Predicted Secondary structure																										.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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