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Job Description | P23874 | Confidence | 5.78% | Date | Wed Jan 25 15:20:44 GMT 2012 |
Rank | 87 | Aligned Residues | 35 |
% Identity | 11% | Template | c2zdqA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8
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Resolution | 2.30 Å |
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190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | N | A | T | L | D | L | S | Q | S | V | D | N | E | Y | Y | C | L | L | L | A | K | E | L | G | L | N | V | P | D | A | E | I | I | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | G | A | G | V | A | A | S | A | L | C | M | D | K | D | L | S | K | R | V | L | A | Q | A | G | V | P | V | V | P | W | V | A | V | R |
Template Known Secondary structure |   |
S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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