Return to main results Retrieve Phyre Job Id

Job DescriptionP45422
Confidence90.99%DateThu Jan 5 12:02:35 GMT 2012
Rank14Aligned Residues64
% Identity23%Templatec2wmpB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:papg protein; PDBTitle: structure of the e. coli chaperone papd in complex with the pilin2 domain of the papgii adhesin
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  AACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGG
Query Conservation   


  

 

 



 
    

 
  
 
  
   






 
 

    


  
                     
Alig confidence 









.














......


































.............
Template Conservation 


 

 
 
. 
 

 
 
  

  ...... 






 



  

  




 
 
  
 


.............
Template Sequence  GGCRPSAQSL. EIKHGDLSINSANNH. . . . . . YAAQTLSVSCDVPANIRFMLLRNTTPTYSHGKKFS. . . . . . . . . . . . .
Template Known Secondary structure 




S

.




S

SSS
TT
......SS
SS

SS

TTS
.............
Template Predicted Secondary structure 






.





......













.............
Template SS confidence 















































































   195....200.... .....210......... 220.........230.........240.........250....
 
   115....120......
Predicted Secondary structure 





Query SS confidence 











Query Sequence  YISQTTRLFGLG
Query Conservation          



Alig confidence  ........



Template Conservation  ........



Template Sequence  . . . . . . . . VGLG
Template Known Secondary structure  ........
Template Predicted Secondary structure  ........
Template SS confidence 











   255...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions