Job Description P45422 Confidence 97.77% Date Thu Jan 5 12:02:35 GMT 2012 Rank 1 Aligned Residues 154 % Identity 15% Template c2jtyA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus Resolution UNK

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																													.																																		.	.	.
Query SS confidence																													.																																		.	.	.
Query Sequence		S	A	Q	A	A	D	R	V	S	I	D	V	K	V	T	L	E	A	A	A	C	T	P	I	L	S	N	.	G	G	V	V	N	F	G	S	H	S	V	N	R	L	S	T	Q	H	Y	T	Q	I	G	T	R	N	I	N	M	T	I	T	C	.	.	.	E	S	A	T	G	I	A	I	T	A	R	D	T	R	M	D
Query Conservation																													.																																		.	.	.
Alig confidence																													.																			.															.	.	.
Template Conservation																																																.
Template Sequence		A	A	T	T	V	N	G	G	T	V	H	F	K	G	E	V	V	N	A	A	C	A	V	D	A	G	S	V	D	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	.	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	S	K	A	A	V	A	F	L	G	T	A	I	D
Template Known Secondary structure							S	S	S	S					S	S					S	S																		G	G	G		S	S			.				S													T	T	T		S										B	S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	T	G	K	D	S	G	G	Q	S	G	V	K	Y	T	L	N	G	G	G	Y	I	S	Q	T	T	R	L	F	G	L	G	K	T	K	D	N	K	N	I	G	S	Y	A	V	L	I	D	S	N	N	I	S	A	S	N	G	S	Q	T	L	A	V	S	I	A	G	A	D	A	V	I	T	G	Q	K	R	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	H	T	N	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	F	S	S	E	T	T	L	N	N	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	T	T	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T	T	S		S	S								T	T	S		B			B	T	S											S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.																							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	T	L	T	A	Y	P	L	A	V	D	Q	S	Y	Y	Y	T	F	V	K	P	G	E	T	T	P	T	P	V	T	N	A	I	I	P	L	Q	V	S	A	S	I	A	N	D	L	G	G	S	E	K	I	E	L	D	G	K	A	V	I	S	V	V	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	G	A	A	.	.	.	T	P	G	A	A	N	A	D	A	T	F	K	V	Q	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S		.	.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
																																127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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