Return to main results Retrieve Phyre Job Id

Job DescriptionP33342
Confidence99.74%DateWed Jan 25 15:20:50 GMT 2012
Rank13Aligned Residues78
% Identity22%Templated3bwuc2
SCOP infoC2 domain-like Periplasmic chaperone C-domain Periplasmic chaperone C-domain
Resolution1.76

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDK
Query Conservation          
        
 
 
 

  
 
  
             
 
       
       
    


 
      
Alig confidence 







































..





































Template Conservation 

  
  

        
 
 




 


  
       ..   

 
 
             
    




  
   
Template Sequence  PPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVL. . ENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKM
Template Known Secondary structure 
GGGSGGG

SS
SSS
TT
..


TT

TT

S

TTS
B


Template Predicted Secondary structure 









..




















Template SS confidence 















































































   123......130.........140.........150.........160.. .......170.........180.........190.........200
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions