Return to main results Retrieve Phyre Job Id

Job DescriptionP33342
Confidence97.77%DateWed Jan 25 15:20:50 GMT 2012
Rank18Aligned Residues88
% Identity13%Templated1m1sa_
SCOP infoImmunoglobulin-like beta-sandwich PapD-like MSP-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  HAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKL
Query Conservation   
 
 
  



         
 
 
    
 


  
               





   
 
   
 


      
Alig confidence 










































..........


























Template Conservation   
 
 
 
  
 
          
 
 
   







    ..........
 
 
  


 
     
 

      
Template Sequence  HSXINVDPPTGNYPATGGNSTHNITSESDSRLAFKVKSSNNEH. . . . . . . . . . YRVRPVYGFVDAKGKSKLDINRLPGPP
Template Known Secondary structure 

SSS
TT

SSSS
TTT..........
S
TT

S

S
Template Predicted Secondary structure 
















..........












Template SS confidence 















































































   98.100.........110.........120.........130.........140 .........150.........160.......
 
   112.......120.........130..
Predicted Secondary structure 










Query SS confidence 




















Query Sequence  PTNKESIFYLNVLDIPPNSPE
Query Conservation 
 



 
 
 
  

     
Alig confidence 



...













Template Conservation    

...
 
          
Template Sequence  KEDK. . . IVIQYAEVPAEETD
Template Known Secondary structure 
...
TT


Template Predicted Secondary structure 


...






Template SS confidence 




















   168.170. ........180.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions