Return to main results Retrieve Phyre Job Id

Job DescriptionP33342
Confidence99.97%DateWed Jan 25 15:20:50 GMT 2012
Rank12Aligned Residues110
% Identity36%Templated1l4ia1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60. ........70.........80.........90.........100......... 110.
Predicted Secondary structure 










.
























.

Query SS confidence 



























.















































.

Query Sequence  GIVIYGTRIIYPAENKEVMVQLMNQGNR. SSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPN. KL
Query Conservation   
 
  



         
 
 
    .
 


  
               





   
 
   
 


     . 
Alig confidence 



























.












.....





























.

Template Conservation 

 
  



  
      
 
 
       


 
      .....     






 

 
   
 


       
Template Sequence  GVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAEG. . . . . KKDARFVITPPLFSMQGKKENTLRIIDATNGQM
Template Known Secondary structure 
S
STT
S

TT
TTS.....
B
SSSSSS

TT
S
Template Predicted Secondary structure 

















.....

















Template SS confidence 















































































   1........10.........20.........30.........40.. .......50.........60.........70.....
 
   112.......120.........130.........140.........150......
Predicted Secondary structure 



















Query SS confidence 












































Query Sequence  PTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGI
Query Conservation 
 



 
 
 
  

           
 
     






  
Alig confidence 
















........



















Template Conservation 
 



   
 
  

 ........  
    
  






  
Template Sequence  PEDRESLFWVNVKAIPA. . . . . . . . MDLQFAIVSRIKLLYRPQGL
Template Known Secondary structure 
SSS

........






TT
Template Predicted Secondary structure 





........




Template SS confidence 












































   76...80.........90.. .......100.........110..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions