Job Description P33342 Confidence 45.19% Date Wed Jan 25 15:20:50 GMT 2012 Rank 49 Aligned Residues 183 % Identity 10% Template c3rb7E_ PDB info PDB header:metal binding protein Chain: E: PDB Molecule:na/ca exchange protein; PDBTitle: crystal structure of cbd12 from calx1.2 Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																													.	.																																						.
Query SS confidence																													.	.																																						.
Query Sequence		I	V	I	Y	G	T	R	I	I	Y	P	A	E	N	K	E	V	M	V	Q	L	M	N	Q	G	N	R	.	.	S	S	L	L	Q	A	W	I	D	D	G	D	T	S	L	P	P	E	K	I	Q	V	P	F	M	L	T	P	P	V	A	K	I	G	A	N	S	.	G	Q	Q	V	K	I	K	I	M	P	N	K	L
Query Conservation																													.	.																																						.
Alig confidence																													.	.																			.	.	.	.	.															.
Template Conservation																																																	.	.	.	.	.
Template Sequence		M	Y	F	E	P	G	H	Y	T	V	M	E	N	C	G	E	F	E	V	R	V	V	R	R	G	D	I	S	T	Y	A	S	V	E	Y	E	T	Q	D	G	T	A	S	A	G	T	D	.	.	.	.	.	F	V	G	R	K	G	L	L	S	F	P	P	G	V	D	E	Q	R	F	R	I	E	V	I	D	D	D	V
Template Known Secondary structure					S	S		B					T	T	S											S		S	S	S											S	S	S		T	T	T	T	.	.	.	.	.	S											S	S														S	S
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490						.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	N	K	E	S	I	F	Y	L	N	V	L	D	I	P	P	N	S	P	E	Q	E	G	K	N	A	L	K	F	A	M	Q	N	R	I	K	L	F	Y	R	P	A	G	I	A	P	V	N	K	A	T	F	K	K	L	L	V	N	R	S	G	N	G	L	V	I	K	N	D	S	A	N	W	V	T	I	S	D	V
Query Conservation
Alig confidence								.																																																			.	.	.	.	.	.
Template Conservation								.																																																			.	.	.	.	.	.
Template Sequence		F	E	E	D	E	C	.	F	Y	I	R	L	F	N	P	S	E	G	V	K	L	A	V	P	M	I	A	T	V	M	I	L	D	D	D	H	A	G	I	F	A	F	T	D	S	V	F	E	I	T	E	S	V	G	R	F	E	.	.	.	.	.	.	L	K	V	M	R	Y	S	G	A	R	G	T	V	I	V	P	Y
Template Known Secondary structure								.										T	T			B		S	S																			S		S						G	G	G					.	.	.	.	.	.							S				S
Template Predicted Secondary structure								.																																																			.	.	.	.	.	.
Template SS confidence
		519	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.							.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	N	N	V	K	V	N	Y	E	T	I	M	I	A	P	L	E	S	Q	S	V	N	V	K	S	N	N	A	N	N	W	H	L	T	I	I	D	D
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		W	T	E	N	D	T	A	T	E	S	K	D	Y	E	G	A	R	G	E	L	V	F	E	.	N	N	E	S	E	K	F	I	D	L	F	I	L	E	E
Template Known Secondary structure						S	S	S		T	T	T	T	B											.	T	T										B
Template Predicted Secondary structure																									.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.		.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions