 |
Job Description | P33342 | Confidence | 9.33% | Date | Wed Jan 25 15:20:50 GMT 2012 |
Rank | 85 | Aligned Residues | 52 |
% Identity | 17% | Template | c3qe5A_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:major cell-surface adhesin pac; |
PDBTitle: complete structure of streptococcus mutans antigen i/ii carboxy-2 terminus
|
Resolution | 2.50 Å |
|
 |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 220 | . | . | . | . | |
|
. | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  | . | . |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
N | D | S | A | N | W | V | T | I | S | D | V | K | A | N | N | V | K | V | N | Y | E | T | I | M | I | A | P | L | E | S | Q | S | V | N | V | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | N | N | A | N | N | W | H | . |
. |
L | T | I | I | D | D | H |
Query Conservation |   |
|   |
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   | . | . |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |
|
|   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|
Template Sequence |   |
N | P | N | N | N | Y | I | K | P | T | K | V | N | K | N | E | N | G | V | V | I | D | G | K | T | V | L | A | G | S | T | N | Y | Y | E | L | T | W | D | L | D | Q | Y | K | N | D | R | S | S | A | D | T | I | Q | K | G | F | Y | Y | V | D | D | Y |
Template Known Secondary structure |   |
| T | T |
|
|
|
|
|
|  |  |  |  |  |
| T | T | S |
| B |
| T | T |
| B |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
| G | G | G | T | T | B |
|
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1151 | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|