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Job DescriptionP33342
Confidence75.58%DateWed Jan 25 15:20:50 GMT 2012
Rank35Aligned Residues104
% Identity9%Templatec3ginB_
PDB info PDB header:metal binding proteinChain: B: PDB Molecule:sodium/calcium exchanger 1; PDBTitle: crystal structure of e454k-cbd1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50........ .60. ........70.........80.........90.........100 .........110
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Query Sequence  IVIYGTRIIYPAENKEVMVQLMNQ. GNR. . SSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQ. QVKIKIMPNK
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Template Sequence  IFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSD. . . . . YEFTEGTVVFKPGETQKEIRVGIIDDD
Template Known Secondary structure  S
STTSSSS
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BTTT.....B



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B


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   374.....380.........390.........400.........410.........420. ........430.........440........
 
   111........120.........130.........140....
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Query Sequence  LPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQ
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Template Sequence  IFEEDKN. FLVHLSNVKVSLACLGSPSTATVTIF
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S

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   449450..... ....460.........470.........480.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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