Job Description P33342 Confidence 100.00% Date Wed Jan 25 15:20:50 GMT 2012 Rank 1 Aligned Residues 190 % Identity 29% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	A	G	I	V	I	Y	G	T	R	I	I	Y	P	A	E	N	K	E	V	M	V	Q	L	M	N	Q	G	N	R	S	S	L	L	Q	A	W	I	D	D	G	D	T	S	L	P	P	E	K	I	Q	V	P	F	M	L	T	P	P	V	A	K	I	G	A	N	S	G	Q	Q	V	K	I	K	I	M	P	N
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	.	.	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	G
Template Known Secondary structure										S	S	S						T	T		S										S	S	S											T	T	S			.	.	.	.	.	.	.						S	S						T	T											S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	T	N	K	E	S	I	F	Y	L	N	V	L	D	I	P	P	N	S	P	E	Q	E	G	K	N	A	L	K	F	A	M	Q	N	R	I	K	L	F	Y	R	P	A	G	I	A	P	V	N	K	A	T	F	K	K	L	L	V	N	R	S	G	N	G	L	V	I	K	N	D	S	A	N	W	V	T	I	S
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		V	F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	V	G	.	.	.	.	.	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G
Template Known Secondary structure					S	S	S																	.	.	.	.	.																		T	T	S		S		G	G	G	T	G	G	G							T	T								S	S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	A	N	N	V	K	V	N	Y	E	T	I	M	I	A	P	L	E	S	Q	S	V	N	V	K	S	N	N	A	N	N	W	H	L	T	I	I	D	D	H	G	N	Y	I	S	D
Query Conservation
Alig confidence											.	.																	.	.	.	.
Template Conservation											.	.																	.	.	.	.
Template Sequence		E	L	T	F	G	G	K	S	I	.	.	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	.	.	.	.	R	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L
Template Known Secondary structure						T	T				.	.							T	T									.	.	.	.								B		T	T	S		B
Template Predicted Secondary structure											.	.																	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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