Job Description P33342 Confidence 14.38% Date Wed Jan 25 15:20:50 GMT 2012 Rank 74 Aligned Residues 156 % Identity 10% Template c1l9mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		A	E	N	K	E	V	M	V	Q	L	M	N	Q	G	N	R	S	S	L	L	Q	A	W	I	D	D	G	D	T	S	L	P	P	E	K	I	Q	V	P	F	M	L	T	P	P	V	A	K	I	G	A	N	S	G	Q	Q	V	K	I	K	I	M	P	N	.	.	.	K	L	P	T	N	K	E	S	I	F	Y	L	N
Query Conservation																																																																		.	.	.
Alig confidence																																								.																										.	.	.
Template Conservation																																								.
Template Sequence		G	K	E	V	N	L	V	L	L	L	K	N	L	S	R	D	T	K	T	V	T	V	N	M	T	A	W	T	I	I	Y	N	G	T	L	V	H	E	.	V	W	K	D	S	A	T	M	S	L	D	P	E	E	E	A	E	H	P	I	K	I	S	Y	A	Q	Y	E	R	Y	L	K	S	D	N	M	I	R	I	T	A
Template Known Secondary structure		T	S												S	S	S															T	T							.												T	T																T	T			T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																												.																																					.	.	.	.	.
Query SS confidence																												.																																					.	.	.	.	.
Query Sequence		V	L	D	I	P	P	N	S	P	E	Q	E	G	K	N	A	L	K	F	A	M	Q	N	R	I	K	.	L	F	Y	R	P	A	G	I	A	P	V	N	K	A	T	F	K	K	L	L	V	N	R	S	G	N	G	L	V	I	K	N	D	S	A	N	.	.	.	.	.	W	V	T	I	S	D	V	K	A	N	N	V
Query Conservation																												.																																					.	.	.	.	.
Alig confidence						.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation						.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		V	C	K	V	.	.	.	.	.	P	D	E	S	E	V	V	V	E	R	D	I	I	L	D	N	P	T	L	T	L	E	V	L	N	E	A	R	V	R	K	P	V	N	V	Q	.	.	.	.	.	.	.	.	.	M	L	F	S	N	P	L	D	E	P	V	R	D	C	V	L	M	V	E	G	S	G	L	L	L	G
Template Known Secondary structure						.	.	.	.	.	T	T													B										S			B	T	T							.	.	.	.	.	.	.	.	.							S	S	S		B		S								T	T	T	S	S	S
Template Predicted Secondary structure						.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		574	.	.	.						.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.										.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	Y	E	T	I	M	I	A	P	L	E	S	Q	S	V	N	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	K	I	D	V	P	T	L	G	P	K	E	R	S	R	V	R	F	D
Template Known Secondary structure										B		T	T
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions