Job Description P33342 Confidence 37.60% Date Wed Jan 25 15:20:50 GMT 2012 Rank 50 Aligned Residues 91 % Identity 23% Template c1e42A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:ap-2 complex subunit beta; PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2 Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																								.							.	.
Query SS confidence																																																								.							.	.
Query Sequence		G	I	V	I	Y	G	T	R	I	I	Y	P	A	E	N	K	E	V	M	V	Q	L	M	N	Q	G	N	R	S	S	L	L	Q	A	W	I	D	D	G	D	T	S	L	P	P	E	K	I	Q	V	P	F	M	L	.	T	P	P	V	A	K	.	.	I	G	A	N	S	G	Q	Q	V	K	I	K	I	M	P	N	K
Query Conservation																																																								.							.	.
Alig confidence										.																																			.	.	.	.	.	.	.	.				.							.	.																	.
Template Conservation										.																																			.	.	.	.	.	.	.	.																													.
Template Sequence		G	L	E	I	S	G	T	F	.	T	H	R	Q	G	H	I	Y	M	E	M	N	F	T	N	K	A	L	Q	H	M	T	D	F	A	I	Q	F	N	K	N	S	F	G	.	.	.	.	.	.	.	.	V	I	P	S	T	P	L	A	I	H	T	P	L	M	P	N	Q	S	I	D	V	S	L	P	L	N	T	L	.
Template Known Secondary structure		T								.				T	T												S	S	S		B										B	T	T		.	.	.	.	.	.	.	.				S	S						S		B		T	T											S		.
Template Predicted Secondary structure										.																																			.	.	.	.	.	.	.	.																													.
Template SS confidence
		722	.	.	.	.	.	.	.		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.									.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	T	N	K	E	S	I	F	Y	L	N	V	L	D	I	P	P	N	S	P	E	Q	E	G	K	N	A	L	K	F	A	M	Q	N	R	I	K	L	F	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	M	K	M	E	P	L	N	N	L	Q	V	A	V	K	N	N	I	D	V	F	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B				S	S	T	T									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions