Job Description Q46896 Confidence 100.00% Date Thu Jan 5 12:35:36 GMT 2012 Rank 1 Aligned Residues 261 % Identity 99% Template c3nkdB_ PDB info PDB header:immune system Chain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12 Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	K	D	R	V	S	M	I	F	L	Q	Y	G	Q	I	D	V	I	D	G	A	F	V	L	I	D	K	T	G	I	R	T	H	I	P	V	G	S	V	A	C	I	M	L	E	P	G	T	R	V	S	H	A	A	V	R	L	A	A	Q	V	G	T	L	L	V	W	V	G	E	A	G	V	R	V	Y	A	S
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		I	P	L	K	D	R	V	S	M	I	F	L	Q	Y	G	Q	I	D	V	I	D	G	A	F	V	L	I	D	I	R	T	.	.	.	H	I	P	V	G	S	V	A	C	I	M	L	E	P	G	T	R	V	S	H	A	A	V	R	L	A	A	Q	V	G	T	L	L	V	W	V	G	E	A	G	V	R	V	Y	A	S
Template Known Secondary structure				G	G	G	S								S	S						T	T										.	.	.				G	G	G								T	T														T	T								G	G	G
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	P	G	G	A	R	S	D	K	L	L	Y	Q	A	K	L	A	L	D	E	D	L	R	L	K	V	V	R	K	M	F	E	L	R	F	G	E	P	A	P	A	R	R	S	V	E	Q	L	R	G	I	E	G	S	R	V	R	A	T	Y	A	L	L	A	K	Q	Y	G	V	T	W	N	G	R	R	Y	D	P	K
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	Q	P	G	G	A	R	S	D	K	L	L	Y	Q	A	K	L	A	L	D	E	D	L	R	L	K	V	V	R	K	M	F	E	L	R	F	G	E	P	A	P	A	R	R	S	V	E	Q	L	R	G	I	E	G	S	R	V	R	A	T	Y	A	L	L	A	K	Q	Y	G	V	T	W	N	G	R	.	.	.	.	.
Template Known Secondary structure			S	S	S		S																															S	S				T	T																										T				S			.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	E	K	G	D	T	I	N	Q	C	I	S	A	A	T	S	C	L	Y	G	V	T	E	A	A	I	L	A	A	G	Y	A	P	A	I	G	F	V	H	T	G	K	P	L	S	F	V	Y	D	I	A	D	I	I	K	F	D	T	V	V	P	K	A	F	E	I	A	R	R	N	P	G	E	P	D	R	E	V	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	G	D	T	I	N	Q	C	I	S	A	A	T	S	C	L	Y	G	V	T	E	A	A	I	L	A	A	G	Y	A	P	A	I	G	F	V	H	T	G	K	P	L	S	F	V	Y	D	I	A	D	I	I	K	F	D	T	V	V	P	K	A	F	E	I	A	R	R	N	P	G	E	P	D	R	E	V	R
Template Known Secondary structure		.	.	.																											T	T			T	T			S	S	S		S	S	T	T											T	T	T	T										T	T			S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	C	R	D	I	F	R	S	S	K	T	L	A	K	L	I	P	L	I	E	D	V	L	A	A	G	E	I	Q	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	C	R	D	I	F	R	S	S	K	T	L	A	K	L	I	P	L	I	E	D	V	L	A	A	G	E	I	Q	P	P
Template Known Secondary structure												T															T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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