Job Description Q46896 Confidence 100.00% Date Thu Jan 5 12:35:36 GMT 2012 Rank 4 Aligned Residues 233 % Identity 17% Template c2yzsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 aquifex aeolicus Resolution 2.00 Å

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		18	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		I	F	L	.	Q	Y	G	Q	I	D	V	I	D	G	A	F	V	L	I	D	K	T	G	I	R	T	H	I	P	V	G	S	V	A	C	I	M	L	E	P	G	T	R	V	S	H	A	A	V	R	L	A	A	Q	V	G	T	L	L	V	W	V	G	E	A	G	V	R	V	Y	A	S	G	Q	P	G	G	A	R	S
Query Conservation					.
Alig confidence					.																.	.																																																							.
Template Conservation																					.	.																																																							.
Template Sequence		Y	Y	I	N	S	H	G	T	L	S	R	H	E	N	T	L	R	F	E	.	.	N	E	V	K	K	D	I	P	V	E	D	V	E	E	I	F	V	F	A	E	L	S	L	N	T	K	L	L	N	F	L	A	S	K	G	I	P	L	H	F	F	N	Y	Y	G	Y	Y	T	G	T	F	Y	P	R	.	E	S	S	G
Template Known Secondary structure						S								T	T						.	.									T	T	T		S						S																T								T	T	S									S	.	S
Template Predicted Secondary structure																					.	.																																																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.															.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	L	L	Y	Q	A	K	L	A	L	D	E	D	L	R	L	K	V	V	R	K	M	F	E	L	R	F	G	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	R	R	S	V	E	Q	L	R	G	I	E	G	S	R	V	R	A	T	Y	A	L	L	A	K	Q	Y	G	V	T	W	N	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	L	I	K	Q	V	E	H	Y	L	D	A	Q	K	R	L	Y	L	A	K	S	F	V	I	G	S	I	L	N	L	E	Y	V	Y	K	I	S	A	D	T	Y	L	N	K	V	K	E	T	N	S	I	P	E	L	X	S	V	E	A	E	F	R	K	L	C	Y	K	K	L	E	E	V	T	G	W	E	L	E	K
Template Known Secondary structure													S																																							S																												S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	D	P	K	D	W	E	K	G	D	T	I	N	Q	C	I	S	A	A	T	S	C	L	Y	G	V	T	E	A	A	I	L	A	A	G	Y	A	P	A	I	G	F	V	H	T	G	K	P	L	S	F	V	Y	D	I	A	D	I	I	K	F	D	T	V	V	P	K	A	F	E	I	A	R	R	N	P	G	E
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		R	T	K	R	P	.	.	.	.	P	Q	N	P	L	N	A	L	I	S	F	G	N	S	L	T	Y	A	K	V	L	G	E	I	Y	K	T	Q	L	N	P	T	V	S	Y	L	H	E	P	S	R	F	S	L	S	L	D	V	A	E	V	F	K	P	I	F	V	D	N	L	I	I	R	L	I	Q	E	N	K	I	D
Template Known Secondary structure					S	S	.	.	.	.			S																							T	S	S			T	T			S	S	S																				T										T	T	S	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		165	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		243	.	.													.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	E	V	R	L	A	C	R	D	I	F	R	S
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	H	F	S	T	E	L	N	X	T	F	L	N	E	I	G	R	K	V	F	L	K	A	F	N	E
Template Known Secondary structure		G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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