Return to main results Retrieve Phyre Job Id

Job DescriptionQ46851
Confidence100.00%DateThu Jan 5 12:35:13 GMT 2012
Rank19Aligned Residues279
% Identity22%Templated1qwka_
SCOP infoTIM beta/alpha-barrel NAD(P)-linked oxidoreductase Aldo-keto reductases (NADP)
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80..... ....90......
Predicted Secondary structure 





























...




Query SS confidence 

































































. . .










Query Sequence  KSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDF. . . AAYRDELIIST
Query Conservation   

  

 



                 
  
   


  


  

   
 

  

 

    ...   
  
 
 
Alig confidence 















.....


























.....












...










Template Conservation   

  

 

 

   .....        
  
   

   


  

.....

  

 

          
    
  
Template Sequence  SNGVEMPVIGLGTWQS. . . . . SPAEVITAVKTAVKAGYRLIDTASVYQ. . . . . NEEAIGTAIKELLEEGVVKREELFITT
Template Known Secondary structure  TTS
SB

TT
.....
T



GGGT.....
TS

GGG
Template Predicted Secondary structure 








.....










.....






Template SS confidence 















































































   11........20...... ...30.........40.........50... ......60.........70.........80
 
   97..100.........110.........120.........130.........140.. .......150.........160.......
Predicted Secondary structure 





























.........









Query SS confidence 













































. . . . . . . . .
























Query Sequence  KAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDE. . . . . . . . . NTPMEETASALAHAVQSGKALYVGI
Query Conservation 
              
   
  
 
 

  
  
 


  

  
 .........         

  
   
 
  


Alig confidence 




........
































.........
























Template Conservation 
    ........         
   

  
  
 


  

  
               
    
  
   
 
  

 
Template Sequence  KAWTH. . . . . . . . ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGV
Template Known Secondary structure 
TT........TSSTTTT
S
BSS
S

TTS
S


TTSBSS
Template Predicted Secondary structure 




........































Template SS confidence 















































































   81.... ....90.........100.........110.........120.........130.........140.........150..
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  SSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQDSRMHRE
Query Conservation 
                        
   

                 

 
 
   
  
 
                 
Alig confidence 











...



















...







































..
Template Conservation 
           ...          
         ...           
      

  
 
               ..
Template Sequence  SNWNNDQISRAL. . . ALGLTPVHNSQVELHLYFPQ. . . HDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAP. .
Template Known Secondary structure  S

...TT
SS



BTTB

...TT
STT
S



B
TT

B


..
Template Predicted Secondary structure 



...














...

























..
Template SS confidence 















































































   153......160.... .....170.........180.... .....190.........200.........210.........220....
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  GNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQ
Query Conservation                        
  

   
 
  
 

   
    
  

 
    
 
 


 

    

 
    
Alig confidence  .............
































..



















.










Template Conservation  .............         
  

     
 




   
   .. 


 
      
 


 
 .   

 

   
Template Sequence  . . . . . . . . . . . . . APSDLQDQNVLALAEKTHKTPAQVLLRYALDRG. . CAILPKSIQENRIKENFEVF. DFSLTEEDIAK
Template Known Secondary structure  .............
SSGGG
T

TT..




S

S.S



Template Predicted Secondary structure  .............





..






.




Template SS confidence 















































































   225....230.........240.........250....... ..260.........270....... ..280........
 
   328.330.........340
Predicted Secondary structure 








Query SS confidence 












Query Sequence  IDQHIADGELNLW
Query Conservation 
           
Alig confidence 












Template Conservation 

      
    
Template Sequence  LEESKNSQRLFLQ
Template Known Secondary structure  TTT




S


Template Predicted Secondary structure 







Template SS confidence 












   289290.........300.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions