|   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | E | S | Q | R | A | I | L | R | K | A | F | D | L | G | I | T | H | F | D | L | A | N | N | Y | G | P | P | P | G | S | A | E | E | N | F | G | R | L | L | R | E | D | F | A | A | Y | R | D | E | L | I | I | S | T | K | A | G | Y | D | M | W | P | G | P | Y | G | S | G | G | S | R | K | Y | L | L | A | S | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   | . | . |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
| . | . | . |   |   |   |   |
|   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
S | P | E | E | M | A | A | D | A | E | N | Y | L | K | Q | G | F | Q | T | L | K | I | K | V | G | K | D | . |
. |
D | I | A | T | D | I | A | R | I | Q | E | I | R | K | R | V | G | . |
. |
. |
S | A | V | K | L | R | L | D | A | N | Q | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
W | R | P | K | E | A | V | T | A | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S | S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | . | . | . | G | G | S |  |  |  |  |  |
| T | T |
| . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . |
  |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Q | S | L | K | R | M | G | L | E | Y | V | D | I | F | Y | S | H | R | V | D | E | N | T | P | M | E | E | T | A | S | A | L | A | H | A | V | Q | S | G | K | A | . |
L | Y | V | G | I | S | S | Y | S | P | E | R | T | Q | K | M | V | E | L | L | R | E | W | K | I | P | L | L | I | H | Q | P | S | Y | N | L | L |
Query Conservation |   |
|   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
| . |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   | . | . | . | . |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |
| . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
Template Sequence |   |
R | K | M | E | D | . |
. |
. |
. |
A | G | L | G | I | E | L | V | E | Q | P | V | H | K | D | D | . |
. |
. |
. |
L | A | G | L | K | K | V | T | D | A | T | D | T | P | I | M | A | D | E | S | V | F | T | P | R | Q | A | F | E | V | L | Q | . |
. |
. |
. |
. |
T | R | S | A | D | L | I | N | I | K | L | M | K | A |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | . | . | T | T |
|
|  |  |  |  |  |
|
| S |
| T | T |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  | S | T | T |
| S | S |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T | T |
|
| S |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
|
|
|
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | W | V | D | K | S | G | L | L | D | T | L | Q | N | N | G | V | G | C | I | A | F | T | P | L | A | Q | G | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | G | I | S | G | A | E | K | I | N | A | M | A | E | A | C | G | V | E | C | M | V | G | S | M | I | E | T | K | L |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| S | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
  |