|   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
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|
|
|
|
|
|
|
|
|
|
| . |
. |
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|
Query Sequence |   |
L | E | S | Q | R | A | I | L | R | K | A | F | D | L | G | I | T | H | F | D | . |
. |
L | A | N | N | Y | G | P | P | P | G | S | A | E | E | N | F | G | R | L | L | R | E | D | F | A | A | Y | R | D | E | L | I | I | S | T | K | A | G | Y | D | M | W | P | G | P | Y | G | S | G | G | S | R | K | Y | L | L | A | S |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
| . | . |
|
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
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|
| . | . |
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|
| . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
T | D | M | T | R | A | Y | L | E | R | A | A | A | G | G | V | R | H | A | E | I | M | M | D | P | Q | A | H | T | S | R | G | V | A | L | E | T | C | V | N | G | V | A | N | A | L | A | T | S | E | E | D | F | G | V | S | T | L | L | I | A | A | F | L | R | . |
. |
. |
. |
. |
D | M | S | E | D | S | A | L | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
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|
|
|
|
|
|  |  |
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
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|
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|
| . |
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|
Query Sequence |   |
L | D | Q | S | L | K | R | M | G | L | E | Y | V | D | I | F | Y | S | H | R | V | D | E | N | T | P | M | E | E | T | A | S | A | L | A | H | A | V | Q | S | G | K | A | L | Y | V | G | I | S | . |
S | Y | S | P | E | R | T | Q | K | M | V | E | L | L | R | E | W | K | I | P | L | L | I | H | Q | P | S | Y | N | L |
Query Conservation |   |
  |
|   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
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|
|
| . | . |
|
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| . |
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|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   | . | . |   |   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . |
Template Sequence |   |
L | D | Q | L | L | A | M | . |
. |
H | A | P | I | A | G | I | G | L | D | S | A | E | V | G | N | P | P | S | K | F | E | R | L | Y | Q | R | A | A | E | A | G | L | R | R | I | A | H | A | G | E | E | G | P | A | S | Y | I | T | E | A | L | D | V | L | H | V | E | R | I | D | H | G | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | . | . | T |
|
|
|
|  |  |  |  |  | S |
|
| T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |
| . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
  |   |
155 | . | . | . | . | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
|
|
|
|
|
|
  |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
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|
|
|
|
| . |
|
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|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
| . |
|
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|
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|
|
Query Sequence |   |
L | N | R | W | V | D | K | S | G | L | L | D | T | L | Q | N | N | G | V | G | C | I | A | F | T | P | L | A | Q | G | L | L | T | G | K | Y | L | . |
N | G | I | P | Q | D | S | R | M | H | R | E | G | N | K | V | R | G | L | T | P | K | M | L | T | E | A | N | L | N | S | L | R | L | L | N | E | M | A | Q | Q | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
. |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
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| . |
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|
| . | . |
|
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|
|
|
|
Template Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
| . |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |
|   | . | . |
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
I | R | C | M | E | D | T | D | V | V | Q | R | L | V | A | E | Q | V | P | L | . |
T | V | C | P | L | S | N | V | R | L | R | A | V | D | K | L | A | D | H | P | L | P | E | M | L | A | I | G | L | N | V | C | V | N | S | D | D | P | A | Y | F | G | G | Y | . |
. |
V | D | D | N | F | E | Q | L | V | K | V | L |
Template Known Secondary structure |   |
. | G | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  | . |  |  |
|  |  |  |  |  |  | T | T | S | S | S |
| G | G | G |
| S |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| B | S | T | T | T | T | T |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |
|
|  |  |  |  |  |
|
|
|
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|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
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|
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|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
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|
  |   |
|
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | |
|
. | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
278 | . | 280 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | S | M | A | Q | M | A |
Query Conservation |   |
|   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
Template Sequence |   |
E | F | S | V | P | E | Q | A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . |
  |