Job Description Q46851 Confidence 100.00% Date Thu Jan 5 12:35:13 GMT 2012 Rank 9 Aligned Residues 305 % Identity 26% Template c3n2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the glycerol dehydrogenase akr11b4 from gluconobacter2 oxydans Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		M	Q	Y	R	Y	C	G	K	S	G	L	R	L	P	A	L	S	L	G	L	W	H	N	F	G	.	.	.	H	V	N	A	L	E	S	Q	R	A	I	L	R	K	A	F	D	L	G	I	T	H	F	D	L	A	N	N	Y	G	P	P	P	G	S	A	E	E	N	F	G	R	L	L	R	E	D	F	A	A	Y	R
Query Conservation																											.	.	.
Alig confidence																											.	.	.																															.	.															.	.	.	.
Template Conservation																																																												.	.															.	.	.	.
Template Sequence		S	D	T	I	R	I	P	G	I	D	T	P	L	S	R	V	A	L	G	T	W	A	I	G	G	W	M	W	G	G	P	D	D	D	N	G	V	R	T	I	H	A	A	L	D	E	G	I	N	L	I	D	T	A	P	V	Y	G	.	.	F	G	H	S	E	E	I	V	G	R	A	L	A	E	.	.	.	.	K	P
Template Known Secondary structure		T	S					T	T		S	S				S						T	T	S	S		S	S	S		S	T	T														T	T								T	T	G	G	.	.	G	G													.	.	.	.	S
Template Predicted Secondary structure																																																												.	.															.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		D	E	L	I	I	S	T	K	A	G	Y	D	M	W	P	G	P	Y	G	S	G	.	.	.	.	.	G	S	R	K	Y	L	L	A	S	L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	S	H	R	V	D	E	N	T	P	M	E	E	T	A	S	A	L	A	H	A	V	Q	S	G	K	A	L	Y
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		N	K	A	H	V	A	T	K	L	G	L	H	W	V	G	E	D	E	K	N	M	K	V	F	R	D	S	R	P	A	R	I	R	K	E	V	E	D	S	L	R	R	L	R	V	E	T	I	D	L	E	Q	I	H	W	P	D	D	K	T	P	I	D	E	S	A	R	E	L	Q	K	L	H	Q	D	G	K	I	R	A
Template Known Secondary structure																S	S	S	T	T	T																								T		S	S							S	S			T	T	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	I	S	S	Y	S	P	E	R	T	Q	K	M	V	E	L	L	R	E	W	K	I	P	L	L	I	H	Q	P	S	Y	N	L	L	N	R	W	V	D	K	S	G	L	L	D	T	L	Q	N	N	G	V	G	C	I	A	F	T	P	L	A	Q	G	L	L	T	G	K	Y	L	N	G	I	P	Q	D	S	R	M
Query Conservation
Alig confidence																					.	.	.	.	.																	.
Template Conservation																					.	.	.	.	.																	.
Template Sequence		L	G	V	S	N	F	S	P	E	Q	M	D	I	F	R	E	V	A	P	.	.	.	.	.	L	A	T	I	Q	P	P	L	N	L	F	E	R	T	I	E	.	K	D	I	L	P	Y	A	E	K	H	N	A	V	V	L	A	Y	G	A	L	C	R	G	L	L	T	G	K	M	N	R	D	T	T	F	P	K	D	D
Template Known Secondary structure						S													S		.	.	.	.	.							B		B	T	T	B		G	G	G	.	G	T									T						B		T	T	G	G	G	G	G	G	T				T	T					T	T	S
Template Predicted Secondary structure																					.	.	.	.	.																	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	E	G	N	K	V	R	G	L	T	P	K	M	L	T	E	A	N	L	N	S	L	R	L	L	N	E	M	A	Q	Q	R	G	Q	S	M	A	Q	M	A	L	S	W	L	L	K	D	D	R	V	T	S	V	L	I	G	A	S	R	A	E	Q	L	E	E	N	V	Q	A	L	N	N	L	T	F	S	T	K	E
Query Conservation
Alig confidence							.	.	.																																												.																				.
Template Conservation							.	.	.																																												.																				.
Template Sequence		L	R	S	N	D	.	.	.	P	K	F	Q	K	P	N	F	E	K	Y	L	A	A	M	D	E	F	E	K	L	A	E	K	R	G	K	S	V	M	A	F	A	V	R	W	V	L	D	Q	G	P	V	.	I	A	L	W	G	A	R	K	P	G	Q	V	S	G	V	K	D	V	F	.	G	W	S	L	T	D	E	E
Template Known Secondary structure		G	G	G	G		.	.	.	G	G	G	S	T	T																			T	T													T	T	T	T		.							S	S	G	G	G	G	T	T					S	.	S
Template Predicted Secondary structure							.	.	.																																												.																				.
Template SS confidence
		231	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	I	D	Q	H	I	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	A	V	D	D	I	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions