Job Description Q46851 Confidence 14.50% Date Thu Jan 5 12:35:13 GMT 2012 Rank 77 Aligned Residues 179 % Identity 17% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.																						.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	S	H	R	V	D	E	N	T	P	M	E	E	T	A	S	A	L	A	H	A	V	Q	S	G	.	K	A	L	Y	V	G	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	P	E	R	T	Q	K
Query Conservation																																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E
Template Known Secondary structure													T	B									T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		178	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	V	E	L	L	R	E	W	K	I	.	P	L	L	I	H	Q	P	S	Y	N	L	L	N	R	W	V	D	K	S	G	L	L	D	T	L	Q	N	N	G	V	G	C	I	A	F	T	P	L	A	Q	G	L	L	T	G	K	Y	L	N	G	I	P	Q	D	S	R	M	H	R	E	G	N	K	V	R	G	L	T	P
Query Conservation												.
Alig confidence												.															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	.	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S														.													T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.											.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																					.																							.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																					.																							.	.	.	.	.
Query Sequence		K	M	L	T	E	A	N	L	N	S	L	R	L	L	N	E	M	A	Q	Q	R	G	.	.	.	.	.	.	.	.	.	.	Q	S	M	A	Q	M	A	L	S	W	L	L	K	D	D	R	V	T	S	V	.	L	I	G	A	S	R	A	E	Q	L	E	E	N	V	Q	A	L	N	N	L	T	F	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.																					.																							.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.																					.																							.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G
Template Known Secondary structure		.	.	.	T	T																T	T									T	T														S	S						S	S																			S						S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
				321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	T	K	E	L	A	Q	I	D	Q	H	I	A	D	G	E	L
Query Conservation		.	.
Alig confidence		.	.											.
Template Conservation														.
Template Sequence		V	S	K	K	E	H	A	R	E	I	G	S	.	F	A	D	G	V	V
Template Known Secondary structure				S									T	.	T	S	S
Template Predicted Secondary structure														.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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