 |
Job Description | P37595 | Confidence | 16.13% | Date | Thu Jan 5 11:55:41 GMT 2012 |
Rank | 43 | Aligned Residues | 28 |
% Identity | 18% | Template | c3m1eA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:hth-type transcriptional regulator benm; |
PDBTitle: crystal structure of benm_dbd
|
Resolution | 1.80 Å |
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
. | . | . | |
. | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | T | E | A | V | R | L | L | E | E | C | . |
. |
. |
P | L | F | . |
N | A | G | I | G | A | V | F | T | R | D | E | T |
Query Conservation |   |
|
|   |   |
|
|   |   |
|
|
|   | . | . | . |
|   |
| . |
|
|
|   |
|
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |
Template Sequence |   |
P | L | S | R | Q | I | Q | N | L | E | E | E | L | G | I | Q | L | L | E | R | G | S | R | P | V | K | T | T | P | E | G | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| B |
| T | T |
| S | S |
|
| B |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|