Job Description Q46861 Confidence 38.55% Date Wed Jan 25 15:21:13 GMT 2012 Rank 59 Aligned Residues 152 % Identity 17% Template c3lu2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase Resolution 2.20 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	E	I	E	A	I	R	D	T	V	P	G	F	T	G	V	I	S	D	L	G	G	P	T	A	N	M	Y	M	L	R	C	K	S	P	R	A	E	Q	T	C	R	R	L	S	C	V	Y	P	D	I	C	P	H	M	D	T	N	H	E	P	T	I	N	L	Y	R	R	A	R	D	L	K	G	I	K	K	I	L
Query Conservation
Alig confidence																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	K	L	T	Q	L	L	D	G	G	V	L	S	V	G	.	.	.	.	L	T	W	N	N	A	N	L	A	A	D	G	I	X	E	E	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	L	T	R	F	G	K	D	I	I	H	L	L	N	E	R	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T						.	.	.	.	S		S	S	S			S	S	B		B	T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B														T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.									.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.																	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	G	V	R	Y	D	I	A	V	E	D	P	R	Y	I	K	E	L	A	T	.	.	.	.	.	.	.	.	H	H	V	G	G	Y	L	K	I	A	P	E	H	T	E	E	G	P	L	S	K	M	M	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	G	S	Y	D	R	F	K
Query Conservation																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	V	F	T	D	V	S	H	L	S	V	K	A	F	W	E	T	L	E	Q	A	E	F	V	I	A	S	H	S	S	A	K	A	I	C	A	H	P	R	N	L	D	D	E	Q	I	K	A	X	I	E	H	D	A	X	I	H	V	I	F	H	P	L	F	T	T	N	D	G	V	A	D	I	E	D	V	I
Template Known Secondary structure		.	.	.	T						T	T	B													S	S				S	S			B	T	T	T	S			T	T	S	B											T	T														T	T	S			B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		548	.	550	.	.	.	.	.	.	.	.	.	560		.	.	.	.	.	.	.			.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure															.								.	.							.	.
Query SS confidence															.								.	.							.	.
Query Sequence		E	L	F	D	T	Y	S	K	Q	A	G	K	E	.	Q	Y	L	I	P	Y	F	.	.	I	S	A	H	P	G	.	.	T	R	D	E	D	M	V	N	L	A	L	W	L	K	K	H	R	F	R	L	D	Q	V
Query Conservation															.								.	.							.	.
Alig confidence															.								.	.							.	.																.
Template Conservation																																																.
Template Sequence		R	H	I	D	H	I	C	E	L	G	G	X	K	N	I	G	F	G	S	D	F	D	G	I	P	D	H	V	K	G	L	E	H	A	G	K	Y	Q	N	F	L	E	T	L	G	K	.	H	Y	T	K	E	E	V
Template Known Secondary structure										T	T		G	G	G							B	T	S		S	S			B	T		S	S	G	G	G									T	T	.	T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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