Job Description Q46861 Confidence 42.91% Date Wed Jan 25 15:21:13 GMT 2012 Rank 52 Aligned Residues 150 % Identity 14% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		31	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50										.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		P	M	S	R	E	E	M	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	D	S	C	D	I	I	L	V	.	.	.	.	.	.	.	.	.	T	.	.	.	.	.	.	.	.	.	.	G	D	A	Y	V	D	H	P	S	F	G	M	A	I	C	G	R	M	L	E	A	Q	G	.	.	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K
Template Known Secondary structure																										T		S								T	T	S								T	T	T					S	T	T	S	S	S					T													T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		76	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																	.
Query SS confidence										.	.	.	.	.	.	.	.																	.
Query Sequence		R	V	G	I	I	A	Q	P	.	.	.	.	.	.	.	.	D	W	S	S	K	D	D	F	M	R	L	G	K	P	N	L	.	F	F	G	V	T	A	G	N	M	D	S	M	I	N	R	Y	T	A	D	R	R	L	R	H	D	D	A	Y	T	P	D	N	V	A	G	K	R	P	D	R	A	T	L	V	Y	T	Q
Query Conservation										.	.	.	.	.	.	.	.																	.
Alig confidence										.	.	.	.	.	.	.	.																	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I	N	M	I	K	D	K	V	D	L	I	D	V	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E
Template Known Secondary structure												S	S	T	T	S														T	T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S								T	T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.																						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	K	E	A	W	K	D	V	P	V	I	L	G	G	I	E	A	S	L	R	R	T	A	H	Y	D	Y	W	S	D	T	V	R	R	S	V	L	V	D	S	K	A	D	M	L	M	F	G	N	G	E	R	P	L	V	E	V	A	H	R	L	A	M	G	E	P
Query Conservation
Alig confidence								.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	K	K	R	C	.	N	I	K	T	S	A	V	G	.	.	.	.	.	.	.	.	.	.	.	L	I	T	T	Q	E	L	A	E	E	I	L	S	N	E	R	A	D	L	V	A	L	G	R	E	L	L	R	N	P	Y	W	V	L	H	T	Y	T	S	K	E
Template Known Secondary structure								.	T							S	.	.	.	.	.	.	.	.	.	.	.	S													T	T	S		S					S							T	T							S	S	G	G
Template Predicted Secondary structure								.									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.		.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions