Job Description Q46861 Confidence 79.04% Date Wed Jan 25 15:21:13 GMT 2012 Rank 22 Aligned Residues 173 % Identity 12% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		C	S	I	T	E	H	E	G	R	I	I	Q	S	R	S	E	D	S	I	I	N	E	I	E	A	I	R	D	T	V	P	G	F	.	T	G	V	I	S	D	L	G	G	P	T	A	N	M	Y	M	L	R	C	K	S	P	R	A	E	Q	T	C	R	R	L	S	C	V	Y	P	D	I	C	P	H	M	D	T	N	H
Query Conservation																																			.
Alig confidence								.						.																					.					.	.	.	.	.
Template Conservation								.						.																										.	.	.	.	.
Template Sequence		A	L	L	P	G	H	.	G	L	I	W	K	.	K	D	P	Q	R	L	L	N	H	Y	V	S	V	A	K	G	D	P	K	K	G	K	V	T	V	.	.	.	.	.	I	Y	D	S	X	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	R
Template Known Secondary structure						S	S	.	S		B	B	S	.	S															T				T	T					.	.	.	.	.					S	S	S																T	T										S	S
Template Predicted Secondary structure								.						.																										.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.		.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	T	I	N	L	Y	R	R	A	R	D	L	K	G	I	K	K	I	L	I	A	S	G	V	R	Y	D	I	A	V	E	D	P	R	Y	I	K	E	L	A	T	H	H	V	G	G	Y	L	K	I	A	P	E	H	T	E	E	G	P	L	S	K	M	M	K	P	G	M	G	S	Y	D	R	F	K	E	L	F	D
Query Conservation
Alig confidence																		.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		P	A	I	S	E	I	L	K	D	I	P	D	S	E	A	L	.	.	I	F	G	V	S	T	Y	E	A	E	I	H	P	L	X	R	F	T	L	L	E	I	I	D	K	A	N	Y	E	K	P	V	L	V	F	G	V	H	G	.	.	.	.	.	.	.	.	.	W	A	P	S	A	E	R	T	A	G	E	L	L	K
Template Known Secondary structure											S	T	T		S			.	.								T	T																															.	.	.	.	.	.	.	.	.				T	T	S
Template Predicted Secondary structure																		.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350										.	.	.	.	.	.	.	.	.	360	.	.	.	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	S	K	Q	A	G	K	E	Q	Y	L	I	P	Y	F	I	S	A	H	P	G	T	R	D	E	D	M	V	N	L	A	L	W	L	K	K	H
Query Conservation
Alig confidence								.	.	.	.	.											.
Template Conservation								.	.	.	.	.											.
Template Sequence		E	T	K	F	R	I	.	.	.	.	.	L	S	F	T	E	I	K	G	S	N	.	X	D	E	R	K	I	E	E	A	I	S	L	L	K	K	E
Template Known Secondary structure		T	S	S				.	.	.	.	.								S	S	S	.			T
Template Predicted Secondary structure								.	.	.	.	.											.
Template SS confidence
		365	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions