Job Description Q46861 Confidence 53.21% Date Wed Jan 25 15:21:13 GMT 2012 Rank 37 Aligned Residues 88 % Identity 10% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.					.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		Y	D	I	A	V	E	D	P	R	Y	I	K	E	L	A	T	H	H	V	G	G	Y	L	K	I	A	P	E	H	T	E	E	G	P	L	S	K	M	M	K	P	G	M	G	S	Y	D	R	F	K	E	L	F	D	T	Y	S	K	Q	A	G	K	E	Q	Y	L	.	.	.	.	I	P	Y	F	I	S	A	H	P	G
Query Conservation																																																																				.	.	.	.
Alig confidence															.												.	.	.	.	.	.																										.					.					.	.	.	.
Template Conservation															.												.	.	.	.	.	.																										.					.
Template Sequence		Y	E	V	C	L	K	V	I	E	I	C	R	Q	.	T	K	D	M	N	G	G	V	I	S	F	.	.	.	.	.	.	Q	E	L	E	K	V	H	F	R	K	L	N	V	G	L	D	D	L	E	K	S	I	D	M	L	.	K	S	L	E	.	C	F	E	I	F	Q	I	R	G	K	K	F	L	R	S	V	P	N
Template Known Secondary structure															.		T	T	T	S	S	S					.	.	.	.	.	.						T	T	T	T	T	T	T														.	T	T	T		.								T	T							S	S	S
Template Predicted Secondary structure															.												.	.	.	.	.	.																										.					.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	D	E	D	M	V	N	L	A	L	W	L	K	K	H	R	F	R	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	T	S	D	Q	T	K	I	L	E	I	C	S	I	L	G	Y	S	S	I
Template Known Secondary structure					T	T							T	T	T	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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