Return to main results Retrieve Phyre Job Id

Job DescriptionP22729
Confidence2.12%DateWed Jan 25 15:20:42 GMT 2012
Rank72Aligned Residues18
% Identity17%Templated1ttya_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   295....300.........310..
Predicted Secondary structure 





Query SS confidence 

















Query Sequence  REDEIACRSLGLSPRRIK
Query Conservation    
  

  




 
 
Alig confidence 

















Template Conservation   
  


  



   

Template Sequence  KTLEEVGQYFNVTRERIR
Template Known Secondary structure 

T

Template Predicted Secondary structure 




Template SS confidence 

















   351........360........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions