Job Description P22729 Confidence 2.42% Date Wed Jan 25 15:20:42 GMT 2012 Rank 56 Aligned Residues 206 % Identity 13% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.
Query Sequence		G	P	K	F	I	L	P	A	I	D	G	S	T	V	K	Q	K	L	F	L	V	A	L	L	V	L	A	V	A	W	P	F	M	V	.	.	.	.	.	.	.	.	S	R	G	T	V	D	I	A	T	L	T	M	I	Y	I	I	L	G	L	G	L	N	V	V	V	G	L	S	G	L	L	V	L	G	Y	G	G	F
Query Conservation																																				.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	R	A	G	F	E	E	Y	S	I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S
Template Known Secondary structure					T	T	T	T	T	S					S																						G	G	G	S	S	S	S																													S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	G	A	Y	T	F	A	L	L	N	H	Y	Y	G	L	G	F	W	T	C	L	P	I	A	G	L	M	A	A	A	A	G	F	L	L	G	F	P	V	L	R	L	R	G	D	Y	L	A	I	V	T	L	G	F	G	E	I	V	R	I	L	L	L	N	N	T	E	I	T	G	G	P	N	G	I	S	Q	I
Query Conservation
Alig confidence																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	.	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	T	T	T	.																											T	T				T	T																				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	P	T	L	F	G	L	E	F	S	R	T	A	R	E	G	G	W	D	T	F	S	N	F	F	G	L	K	Y	D	P	S	D	R	V	I	F	L	Y	L	V	A	L	L	L	V	V	L	S	L	F	V	I	N	R	L	L	R	M	P	L	G	R	A	W	E	A	L	R	E	D	E	I	A	C	R	S	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	.	.	.	.	.	.	L	R	V	S	S	Q	E	.	E	Y	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								S				G	G	G	T																																		T		.	.	.	.	.	.	S	B						.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.								.
Template SS confidence
														319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.		.	.	.	.
		306	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	R	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	S	Q	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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