Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S7
Confidence99.08%DateThu Jan 5 11:03:50 GMT 2012
Rank130Aligned Residues138
% Identity13%Templated1gdha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  RNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVV
Query Conservation 
   
 


 
  
   
  
   
  
    
           
                      
     
 


 
Alig confidence 












































..............




















Template Conservation   

 




 
 

  

  
  

  
   
             ..............     

 


   


    
Template Sequence  DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ. . . . . . . . . . . . . . ATFHDSLDSLLSVSQFFSLNA
Template Known Secondary structure  TT


STTT

SS


T..............

SS
S

Template Predicted Secondary structure 

















..............






Template SS confidence 















































































   146...150.........160.........170.........180.........190 .........200.........210.
 
   84 .....90.. .......100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 
..






















Query SS confidence 
.







.






























































Query Sequence  P. SHVFGEVL. RQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAIS
Query Conservation   .      
 .  
         

   


                           
               
Alig confidence 
.







.






























































Template Conservation 


  
  

    
  

 

 


 


 


  

  

  
 
 

 


   

     
    

  
Template Sequence  PSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLF
Template Known Secondary structure 


TTTTT
BSTTS
TT
S
GGGB
TSS

TTTTS

TTGGG
TT
Template Predicted Secondary structure 


































Template SS confidence 









































































   212.......220.........230.........240.........250.........260.........270.........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions