Job Description P0A6S7 Confidence 99.94% Date Thu Jan 5 11:03:50 GMT 2012 Rank 48 Aligned Residues 256 % Identity 16% Template c3qsgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-binding phosphogluconate dehydrogenase-like protein; PDBTitle: crystal structure of nad-binding phosphogluconate dehydrogenase-like2 protein from alicyclobacillus acidocaldarius Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	.	.	.	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V	V
Query Conservation																										.	.	.
Alig confidence																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	G	F	I	G	F	G	E	A	A	S	A	I	A	S	G	L	R	Q	A	G	A	I	D	X	A	A	Y	D	A	A	S	A	E	S	W	R	P	R	A	E	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	C	K	A	S	V	A	E	V	A	G	E	C	D	V	I	F	S	L	V
Template Known Secondary structure									S														S									S	S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S										S						S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	L	A	S	T	D	Q	T	F
Query Conservation
Alig confidence																													.																				.	.	.																													.	.
Template Conservation																													.																				.	.	.																													.	.
Template Sequence		T	A	Q	A	A	L	E	V	A	Q	Q	A	G	P	H	L	C	E	G	A	L	Y	A	D	F	T	S	.	C	S	P	A	V	K	R	A	I	G	D	V	I	S	R	H	R	P	S	.	.	.	A	Q	Y	A	A	V	A	V	X	S	A	V	K	P	H	G	H	R	V	P	L	V	V	D	G	D	G	A	.	.
Template Known Secondary structure			T	T	T									G	G	G			T	T									.																		T	T	.	.	.										S		S	T	T	T	G	G	G	S						S	T	T		.	.
Template Predicted Secondary structure																													.																				.	.	.																													.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	L	Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	L	G	A	D	P	A	T	F	M	G	M
Query Conservation
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	R	F	Q	A	A	F	T	L	Y	G	C	R	I	E	V	L	D	G	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	A	L	L	K	X	C	R	S	A	V	L	K	G	L	E	A	L	F	L	E	A	L	A	A	A	E	K	X	G	L	A	D	R	V	L	A	S	L
Template Known Secondary structure		.									T	T	T								S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																													T	T	T
Template Predicted Secondary structure		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G	M	D	V	Q	S	A	Q	E	K	I	G	Q	V	V	E	G	Y	R	N	T	K	E	V	R	E	L	A	H	R	F	G	V	E	M	P	I	T	E	E	I	Y	Q	V	L	Y	C
Query Conservation
Alig confidence		.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	A	S	F	P	E	H	H	L	R	D	L	A	L	Y	L	V	E	R	N	L	E	H	A	D	R	R	A	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	E	V	A	A	T	L	C	S	V	G	V	E	P	L	V	A	E	A	G	Y	R	R	L	T	R
Template Known Secondary structure		.	.				S	G	G	G	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure		.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.															.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions