Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S7
Confidence99.07%DateThu Jan 5 11:03:50 GMT 2012
Rank131Aligned Residues104
% Identity17%Templatec3pqeD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of l-lactate dehydrogenase from bacillus subtilis2 with h171c mutation
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20......... 30.........40.........50.........60.........70.........
Predicted Secondary structure 










..






















Query SS confidence 



























. .

















































Query Sequence  NQRNASMTVIGAGSYGTALAITLARNGH. . EVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNI
Query Conservation    
   
 


 
  
   
  
   
 .. 
    
           
                      
     
 
Alig confidence 



























..

























....



















Template Conservation   
 
 

 




 

   
  
       

 
 
           

       ....     
       
  



Template Sequence  NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA. . . . PQPVKTSYGTYEDCKDADIV
Template Known Secondary structure 






ST

S
SSTGGGS....SS



GGGGTT
S
Template Predicted Secondary structure 
















....









Template SS confidence 















































































   2.......10.........20.........30.........40.........50....... ..60.........70.......
 
   80.... .....90.........100.........110
Predicted Secondary structure 

..........





Query SS confidence 




. . . . . . . . . .

























Query Sequence  LVVVP. . . . . . . . . . SHVFGEVLRQIKPLMRPDARLVWATK
Query Conservation 

 
 ..........      
   
         

   
Alig confidence 




..........












.











Template Conservation 




  
      
  
       
  .  
 
 


 

Template Sequence  CICAGANRLELVEKNLKIFKGIVSEVMA. SGFDGIFLVATN
Template Known Secondary structure 

S


TTT.TT

S
SS
Template Predicted Secondary structure 







.




Template SS confidence 








































   78.80.........90.........100..... ....110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions