Job Description P0A6S7 Confidence 99.96% Date Thu Jan 5 11:03:50 GMT 2012 Rank 39 Aligned Residues 271 % Identity 13% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																									.	.												.	.	.	.														.						.	.	.	.	.	.	.
Query SS confidence																									.	.												.	.	.	.														.						.	.	.	.	.	.	.
Query Sequence		A	S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	.	.	H	E	V	V	L	W	G	H	D	P	E	.	.	.	.	H	I	A	T	L	E	R	D	R	C	N	A	A	.	F	L	P	D	V	.	.	.	.	.	.	.	P	F	P	D	T	L	H	L	E	S	D	L	A	T
Query Conservation																									.	.												.	.	.	.														.						.	.	.	.	.	.	.
Alig confidence																									.	.												.	.	.	.														.						.	.	.	.	.	.	.													.
Template Conservation																																																																																.
Template Sequence		K	K	I	G	V	L	G	M	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	G	E	S	P	L	K	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	K	F	E	C	T	P	D	F	.	S
Template Known Secondary structure										S	T	T											S	T	T												T	T	T	T	T						T	T	T				S	S			G	G	G											T	T						S		G	.	G
Template Predicted Secondary structure																																																																																.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		A	L	A	A	S	R	N	I	L	V	V	V	P	S	H	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	.	.	.	P	L	A	V
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																									.																						.	.	.
Template Conservation																																																					.
Template Sequence		R	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D	F	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L	E	S	T	.	I	T	P	G	T	T	E	G	M	A	K	Q	I	L	E	E	E	S	G	L	K	A	G	E	D	F	A	L
Template Known Secondary structure		G	G	G	G		S												S	S			S	S																			T	T							S		.			T	T	T	T	T	T														B	T	T	T	B
Template Predicted Secondary structure																																																					.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	.	.	.	S	L	A	S	T	D	Q	T	F	A	D	D	L	Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	A	P	E	R	V	M	V	G	R	L	L	K	N	I	R	E	H	D	R	I	V	G	G	I	D	E	A	S	T	K	R	A	V	E	L	Y	S	P	V	L	T	V	G	Q	V	I	P	M	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	E	V	T	K	T	A	E	N
Template Known Secondary structure										T	T	S								S							S	S												G	G	G		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.																		.	230	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	L	G	A	D	P	A	T	F	M	G	M	A	G	L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G	M	D	V	Q	S	A	Q	E	K	I	G	Q	V	V	E	G	Y	R	N	T	K	E	V
Query Conservation
Alig confidence																																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	R	D	L	Q	I	A	A	I	N	Q	L	A	L	Y	C	E	A	M	G	I	N	V	Y	D	V	R	T	G	V	D	S	L	.	.	.	.	K	G	E	G	I	T	R	A	V	L	W	P	G	A	G	V	G	G	H	C	L	T	K	D	T	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure																					T	T												T	S	.	.	.	.			S	S	S									S				S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300															.
		294	.	.	.	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		R	E	L	A	H	R	F	G	V	E	M	.	.	.	.	.	.	.	P	I	T	E	E	I	Y	Q	V
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	G	V	K	I	G	R	G	E	L	D	Y	P	E	G	A	D	S	I	Y	V	L	A	R	K	V
Template Known Secondary structure						T	T	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions