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Job DescriptionP0A6S7
Confidence99.94%DateThu Jan 5 11:03:50 GMT 2012
Rank47Aligned Residues316
% Identity15%Templatec3c7cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20....... ..30.........40.........50.........60.... .....70......
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Query Sequence  SMTVIGAGSYGTALAITLARN. GHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLH. . . . . . . . . LESDLATALAAS
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Template Sequence  KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISGA
Template Known Secondary structure 

STTSTT

STTTTS

TTS


SS
TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   77..80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  RNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAIS.
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Template Sequence  DVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFE. . FQCRDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLG
Template Known Secondary structure  S
S
GGGTTT

TT
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SS..GGGGGTSSS
STTT
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   84.....90.........100.........110.........120.. .......130.........140.........150.........160.
 
   156...160.........170.........180.........190.........200.........210..
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Query Sequence  . . . . . . . . LASTDQTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGA. . . . . . . . . . . . . . .
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Template Sequence  TKSVLAASLIKGTAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMS. . YSFVHPAILFGRWGSWDGKPVPEAPLFYQGID
Template Known Secondary structure 
S

SS

S

SSS
S
TT..
TTTT

S

BSS

BSGGG

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   162.......170.........180.........190.........200....... ..210.........220.........230.........
 
   213......220.........230......... 240.........250.........260.........270... .
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Query Sequence  NARTALITRGLAEMSRLGAALGADPAT. . FMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDV. . . . . . . . . . . . . . . . Q
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Template Sequence  QATADMLTACSNECKDVANAIMAACPGNDLSDVKDIYQWYLEYYHEDIQDDHDLYHAITTNKSYKGLVHPVKAVDGGVAP
Template Known Secondary structure  STT


TT


STTTBS

SSTBGGGTT
B

TT
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   275....280.........290.........300.........310.........320.........330.......
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Query Sequence  SAQEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERS
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Template Sequence  DFGNRYLTE. DIPMGMIVFKGVAIAAGVAIPSNDKLIMW. . . . . . . . . . AQEKIGKEYLVDGA
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STTTTT.TTTTTT


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BTTB
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   320........ .330.........340.........350....... ..360.........370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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