Job Description P0A6S7 Confidence 98.91% Date Thu Jan 5 11:03:50 GMT 2012 Rank 169 Aligned Residues 154 % Identity 16% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		R	N	A	S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	.	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V
Query Conservation																						.
Alig confidence																						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S
Template Known Secondary structure		T	T	S								S													T	T									S	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S									S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.															.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		83	.		.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.
Predicted Secondary structure				.									.																																																																.	.
Query SS confidence				.									.																																																																.	.
Query Sequence		V	P	.	S	H	V	F	G	E	V	L	.	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	.	.	L	A	S
Query Conservation				.									.																																																																.	.
Alig confidence				.									.																																																																.	.
Template Conservation
Template Sequence		V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G	K	L	L	S	A	G	L	D	V	H	E	F	E	P	N	V	S	K	E	L	I	E	M	K	H	V	T	L	T	T	H	I	G	G
Template Known Secondary structure					S	G	G	G	T	T		B								S		T	T							S		G	G	G	B											T	T	S							S	S		T	T	T	T	S							T	S	S	S					S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	Q	T	F	A	D	D	L	Q	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	I	E	T	F	H	E	F	E	R	L	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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