Job Description P0A6S7 Confidence 99.26% Date Thu Jan 5 11:03:50 GMT 2012 Rank 107 Aligned Residues 174 % Identity 20% Template c2rafC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V	V	P	S	H
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	T	I	F	G	K	G	N	X	G	Q	A	I	G	H	N	F	E	I	A	G	H	E	V	T	Y	Y	G	S	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	T	T	L	G	E	I	V	I	X	A	V	P	Y	P
Template Known Secondary structure									S												T	T	T								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			S						S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																																	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	.	.	.	.	.	.	.	.	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	.	.	.	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S
Query Conservation																													.	.	.	.	.	.	.	.																								.	.	.
Alig confidence															.														.	.	.	.	.	.	.	.																								.	.	.
Template Conservation															.
Template Sequence		A	L	A	A	L	A	K	Q	Y	A	T	Q	L	.	K	G	K	I	V	V	D	I	T	N	P	L	N	F	D	T	W	D	D	L	V	V	P	A	D	S	S	A	A	Q	E	L	Q	Q	Q	L	P	D	S	Q	V	L	K	A	F	N	T	T	F	A	A	T	L	Q	S	G	Q	V	N	G	K	E	P	T	T	V
Template Known Secondary structure										T					.	T	T	S									B		T	T	T	S	S		B	S	S		T	T												T	T	S						S	T	T	S								S			T	T	T
Template Predicted Secondary structure															.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		156		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	A	S	T	D	Q	T	F	A	D	D	L	Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	L	G
Query Conservation			.
Alig confidence			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		L	V	A	G	N	D	D	S	A	K	Q	R	F	T	R	A	L	A	D	S	P	L	E	V	K	D	A	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	A	R	E	L	E	.	.	.	.	.	A	X	G	F	X	Q	X	T	L	A	A	S	E	Q	I	G	W	T	G	G
Template Known Secondary structure						S												T	T	T	S	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G						.	.	.	.	.												T	T	S	S		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																			.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		235	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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