Job Description P0A6S7 Confidence 100.00% Date Thu Jan 5 11:03:50 GMT 2012 Rank 25 Aligned Residues 291 % Identity 14% Template c2p4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae Resolution 2.37 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	N	Q	R	N	A	S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence						.	.	.																																											.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation						.	.	.																																											.	.	.	.	.	.	.	.	.
Template Sequence		M	S	A	D	.	.	.	F	G	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	A	A	D	H	G	F	T	V	C	A	Y	N	R	T	Q	S	K	V	D	H	F	L	A	N	E	A	.	.	.	.	.	.	.	.	.	K	G	K	S	I	I	G	A	T	S	I	E	D	F	I	S	K	L	K	R	P	R
Template Known Secondary structure					S	.	.	.							S													T	T								S	S	S									T	T	T	.	.	.	.	.	.	.	.	.	T	T	S	S					S	S							T	S		S	S
Template Predicted Secondary structure						.	.	.																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.				.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		N	I	L	V	V	V	P	S	.	H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	L
Query Conservation										.
Alig confidence										.																										.																																			.	.	.	.	.		.
Template Conservation																																				.																																			.	.	.	.	.		.
Template Sequence		K	V	M	L	L	V	K	A	G	A	P	V	D	A	L	I	N	Q	I	V	P	L	L	E	K	G	D	I	I	I	D	G	G	N	.	S	H	F	P	D	S	N	R	R	Y	E	E	L	K	K	K	G	I	L	F	V	G	S	G	V	S	G	G	E	E	G	A	R	Y	.	.	.	.	.	G	.	P	S	L	M
Template Known Secondary structure									S	S											G	G	G			T	T							S		.																T	T										S								.	.	.	.	.		.
Template Predicted Secondary structure																																				.																																			.	.	.	.	.		.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.		.	.	140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		A	S	T	D	Q	T	F	A	D	D	L	Q	Q	L	L	H	C	G	K	S	F	.	.	.	.	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	G	S	E	E	A	W	P	H	I	K	N	I	F	Q	S	I	S	A	K	S	D	G	E	P	C	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	V	G	P	A	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	D	I	M	K	R
Template Known Secondary structure						G	G	G												S				T	T			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
			233	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.
Predicted Secondary structure		.															.	.	.																																																												.
Query SS confidence		.															.	.	.																																																												.
Query Sequence		.	L	G	A	D	P	A	T	F	M	G	M	A	G	L	.	.	.	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G	M	D	V	Q	S	A	Q	E	K	I	G	Q	V	V	E	G	Y	R	N	T	K	E	V	R	E	L	A	H	R	F	G	V	E	M	P	.	I	T
Query Conservation		.															.	.	.																																																												.
Alig confidence		.															.	.	.																					.																														.	.	.	.						.
Template Conservation																																								.																														.	.	.	.
Template Sequence		L	G	G	F	T	D	K	E	I	S	D	V	F	A	K	W	N	N	G	V	L	D	S	F	L	V	E	I	T	R	D	I	L	K	F	D	D	V	.	D	G	K	P	L	V	E	K	I	M	D	T	A	G	Q	K	G	T	G	K	W	T	A	I	N	A	L	D	L	.	.	.	.	G	M	P	V	T	L	I	G
Template Known Secondary structure		T	T																T	T	T	T		B											T		B		T	.	T	S	S	B	G	G	G	G	S								S													.	.	.	.	T
Template Predicted Secondary structure																																								.																														.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280
		308	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	E	I	Y	Q	.	V	L	Y	C	G	K	N	A	R	E	A	A	L	T	L	L	G	R	A
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		E	A	V	F	A	R	C	L	S	A	L	K	N	E	R	I	R	A	S	K	V	L	P	G	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions