Job Description P0A6S7 Confidence 98.49% Date Thu Jan 5 11:03:50 GMT 2012 Rank 257 Aligned Residues 156 % Identity 15% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.
Predicted Secondary structure															.																					.																																											.	.
Query SS confidence															.																					.																																											.	.
Query Sequence		M	N	Q	R	N	A	S	M	T	V	I	G	A	.	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	.	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	.	.	S
Query Conservation															.																					.																																											.	.
Alig confidence															.																					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	A
Template Known Secondary structure		S			T	T							T	T	T	S														T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T				T	T					S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																				.	.	.	.															.	.
Query SS confidence																																																				.	.	.	.															.	.
Query Sequence		R	N	I	L	V	V	V	P	S	H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	.	.	.	.	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	.	.	T	F	A	K	E	L	A	A	G	L
Query Conservation																																																				.	.	.	.															.	.
Alig confidence																								.	.																											.	.	.	.															.	.
Template Conservation																								.	.
Template Sequence		T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S	I	L	E	A	I	D	A	.	.	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	T	P	G	V	I	T	P	G	E	C	K	I	G	I	Q	P	G	H	I	H	K
Template Known Secondary structure										G	G	G											T	.	.	T																											T						S	S							T	T	T					S	S		G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	A	I	S	L	A	S	T	D	Q	T	F	A	D	D	L	Q	Q	L	L	H	C	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G
Template Known Secondary structure										S															T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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