Job Description P0A6S7 Confidence 99.57% Date Thu Jan 5 11:03:50 GMT 2012 Rank 98 Aligned Residues 207 % Identity 13% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V	V	P	S	H	V
Query Conservation
Alig confidence																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											S
Template Predicted Secondary structure																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	L	A	S	T	D	Q	T	F	A	D	D	L
Query Conservation
Alig confidence											.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	T	V	A	N	H	L	N	.	.	.	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	.	.	.	.	.	.	.	.	.	.	.	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P	I	V
Template Known Secondary structure							T	T	T		.	.	.		S	S								S	S	S		S	T	T	T		.	.	.	.	.	.	.	.	.	.	.	S	S	S								S				T	T	G	G	G		G	G	G									T	T
Template Predicted Secondary structure											.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.												.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	L	G	A	D	P	A	T	F	M	G	M	A	G	L	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		K	K	I	A	E	E	I	S	G	K	Y	F	V	I	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	A	Y	H	L	A	A	V	I	A	S	N	F	P	V	A	L	.	.	.	.	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	I	H	T	L	X	K
Template Known Secondary structure									S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T						.	.	.	.											T	T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V	K	R	G	D
Template Known Secondary structure										S								S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions