Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S7
Confidence97.75%DateThu Jan 5 11:03:50 GMT 2012
Rank396Aligned Residues113
% Identity12%Templatec2fpgA_
PDB info PDB header:ligaseChain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp
Resolution2.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10... ......20.........30... ......40.........50.........60.........70.... ..
Predicted Secondary structure 







.



.



















..

Query SS confidence 












.



















.








































. .

Query Sequence  MNQRNASMTVIGA. GSYGTALAITLARNGHEVVL. WGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALA. . AS
Query Conservation 
  
   
 


 .
  
   
  
   
  
  .  
           
                      
   ..  
Alig confidence 












.



















.



.................



















..

Template Conservation 
    
 
 


 
 
 
          
  


 


 .................  
 

 

  
 

 


    
Template Sequence  YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPG. . . . . . . . . . . . . . . . . KGGKTHLGLPVFNTVKEAKEQTGA
Template Known Secondary structure 


TT
TTTST

TT.................
TT
TTS


Template Predicted Secondary structure 
















.................











Template SS confidence 















































































   11........20.........30.........40......... 50.........60.........70...
 
   77..80.........90.........100.........110.........120.........130..
Predicted Secondary structure 
















Query SS confidence 























































Query Sequence  RNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQI
Query Conservation 
 


 
       
   
         

   


                    
Alig confidence 




















..
































Template Conservation 




 


  
   
 
   .. 


  



 

 
          
   
 

Template Sequence  TASVIYVPPPFAAAAINEAID. . AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRL
Template Known Secondary structure  S


..TT
S

S


T
SS
Template Predicted Secondary structure 


..











Template SS confidence 























































   74.....80.........90.... .....100.........110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions