Job Description P0A6S7 Confidence 98.14% Date Thu Jan 5 11:03:50 GMT 2012 Rank 319 Aligned Residues 146 % Identity 14% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																					.
Query SS confidence																			.																					.
Query Sequence		N	Q	R	N	A	S	M	T	V	I	G	A	G	S	Y	G	T	.	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	.	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I
Query Conservation																			.																					.
Alig confidence																			.																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	R	P	E	N	V	R	D	A	S	V	V
Template Known Secondary structure			T	T								T	T	T	S	T	T											T	T								S	S											T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			G	G	G	G	T	T		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.														70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.					.	.	.	.	.	.	90	.	.	.										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure						.	.	.	.											.	.	.	.	.	.	.	.	.																					.
Query SS confidence						.	.	.	.											.	.	.	.	.	.	.	.	.																					.
Query Sequence		L	V	V	V	.	.	.	.	P	S	H	V	F	G	E	V	L	R	.	.	.	.	.	.	.	.	.	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	.	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E
Query Conservation						.	.	.	.											.	.	.	.	.	.	.	.	.																					.
Alig confidence						.	.	.	.											.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G	G	L	V	K	A	A	G	V	H
Template Known Secondary structure					T	T			T	T										T	T															T	T	S							S	S	S																T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	L	P	T	A	I	S	L	A	S	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	G	H	G	R	Y	L	I	A	E	A	D	E
Template Known Secondary structure						S	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions