Job Description P0A6S7 Confidence 100.00% Date Thu Jan 5 11:03:50 GMT 2012 Rank 5 Aligned Residues 309 % Identity 38% Template c1z82A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V	V	P	S
Query Conservation
Alig confidence																																																				.	.	.												.
Template Conservation																																																				.	.	.												.
Template Sequence		X	R	F	F	V	L	G	A	G	S	W	G	T	V	F	A	Q	X	L	H	E	N	G	E	E	V	I	L	W	A	R	R	K	E	I	V	D	L	I	N	V	S	H	T	S	P	Y	V	E	E	.	.	.	S	K	I	T	V	R	A	T	N	D	L	.	E	E	I	K	K	E	D	I	L	V	I	A	I	P	V
Template Known Secondary structure										S													T	T								S	S											S		B	T	T	B	T	T	.	.	.					S				S		G	.	G	G			T	T							S		G
Template Predicted Secondary structure																																																				.	.	.												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	L	A	S	T	D	Q	T	F	A	D
Query Conservation
Alig confidence														.	.	.																																.	.																													.	.	.
Template Conservation														.	.	.																																.	.																													.	.	.
Template Sequence		Q	Y	I	R	E	H	L	L	R	L	P	V	.	.	.	K	P	S	X	V	L	N	L	S	K	G	I	E	I	K	T	G	K	R	V	S	E	I	V	E	E	I	L	G	C	P	.	.	Y	A	V	L	S	G	P	S	H	A	E	E	V	A	K	K	L	P	T	A	V	T	L	A	G	E	N	S	.	.	.	K
Template Known Secondary structure		G	G						T	T		S	S	.	.	.			S											T	T	T												T				.	.						S	S								T	T										T	T		.	.	.
Template Predicted Secondary structure														.	.	.																																.	.																													.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	L	G	A	D	P	A	T	F	M	G	M	A	G
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		E	L	Q	K	R	I	.	S	T	E	Y	F	R	V	Y	T	C	E	D	V	V	G	V	E	I	A	G	A	L	K	N	V	I	A	I	A	A	G	I	L	D	G	F	G	G	W	D	N	A	K	A	A	L	E	T	R	G	I	Y	E	I	A	R	F	G	X	F	F	G	A	D	Q	K	T	F	X	G	L	A	G
Template Known Secondary structure								.			S	S							S																									T	T																								T	T							T	S	T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		151	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G	M	D	V	Q	S	A	Q	E	K	I	G	Q	V	V	E	G	Y	R	N	T	K	E	V	R	E	L	A	H	R	F	G	V	E	M	P	I	T	E	E	I	Y	Q	V	L	Y	C	G	K	N	A	R	E	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	D	L	X	V	T	C	N	S	R	Y	S	R	N	R	R	F	G	E	L	I	A	R	G	F	N	P	L	K	L	L	E	S	S	N	Q	V	V	E	G	A	F	T	V	K	A	V	X	K	I	A	K	E	N	K	I	D	X	P	I	S	E	E	V	Y	R	V	V	Y	E	G	K	P	P	L	Q	S	X	R
Template Known Secondary structure												T	T													T									T		S	S			T															T	T															S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		326	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions