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Job DescriptionP0A6S7
Confidence99.97%DateThu Jan 5 11:03:50 GMT 2012
Rank32Aligned Residues280
% Identity18%Templatec1vpdA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  SMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVP. .
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Template Sequence  KVGFIGLGIXGKPXSKNLLKAGYSLVVSDRNPEAIADVIAAG. . . . . . . . . . . . . . AETASTAKAIAEQCDVIITXLPNS
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STTTT

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   4.....10.........20.........30.........40..... ....50.........60.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  . . SHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQT
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Template Sequence  PHVKEVALGENGIIEGAKPGTVLIDXSS. IAPLASREISDALKAKGVEXLDAPVSGGEPKAID. . . . . GTLSVXVGGDKA
Template Known Secondary structure  STT


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   70.........80.........90....... ..100.........110.........120.........130. ........140...
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  FADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATFMG
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Template Sequence  IFDKYYDLXKAXAGSVVHTGD. . . . . . . . . . . . . . . . . . IGAGNVTKLANQVIVALNIAAXSEALTLATKAGVNPDLVYQ
Template Known Secondary structure  TTS..................TTTT

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   144.....150.........160.... .....170.........180.........190.........200.....
 
   243......250.........260.........270.........280.........290.........300.........310.... ....
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Query Sequence  MAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVL. . . . YCGK
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Template Sequence  AIRGGLAGSTVLDAKAPXVXDRNFKP. GFRIDLHIKD. . . . . . . . . . LANALDTSHGVGAQLPLTAAVXEXXQALRADGH
Template Known Secondary structure  TTSTT

TT



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   206...210.........220.........230. ........240. ........250.........260.........270....
 
   319320.. .......330.....
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Query Sequence  NARE. . AALTLLGRARKDE
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Template Sequence  GNDDHSALACYYEKLAKVE
Template Known Secondary structure  TTSBGGGT

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   275....280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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