|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
20 | . | . | . | . | . | . | . | . | |
|
|
|
. | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
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|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
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|
|
|
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|
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|
|
| . |
. |
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|
| . |
. |
. |
. |
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| . |
. |
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Query Sequence |   |
S | M | T | V | I | G | A | G | S | Y | G | T | A | . |
. |
L | A | I | T | L | A | R | N | G | . |
. |
. |
. |
H | E | V | V | L | W | . |
. |
G | H | D | P | E | H | I | A | T | L | E | R | D | R | C | N | A | A | F | L | P | D | V | P | F | P | D | T | L | H | L | E | S | D | L | A | T | A | L | A | A | S | R | N |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |   |
|   |   | . | . |   |
|   |   |
|   |   |   |
| . | . | . | . |   |   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
Alig confidence |   |
|
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|
| . | . |
|
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| . | . | . | . |
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| . | . |
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| . | . |
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Template Conservation |   |
|
|   |
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|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |
|
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|
|
Template Sequence |   |
K | I | S | I | I | G | A | G | S | V | R | F | A | L | Q | L | V | G | D | I | A | Q | T | E | E | L | S | R | E | D | T | H | I | Y | X | X | D | V | H | E | R | R | L | N | A | S | Y | I | L | A | R | K | Y | V | E | E | L | N | . |
. |
S | P | V | K | I | V | K | T | S | S | L | D | E | A | I | D | G | A | D | F |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T |
| S | T | T |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . |
|
|
|  |  |  |  |  | S |
|  |  |  |  |  | T | T |
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
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|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
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|  |
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | |
|
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. | . | . | |
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
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Query Sequence |   |
I | L | V | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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. |
. |
. |
. |
. |
. |
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. |
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. |
. |
. |
P | S | H | . |
. |
. |
V | F | G | E | V | L | R | Q | I | K | P | L | M | R | P | D | A | R | L | V | W | A |
Query Conservation |   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|   |
|   |
| . |
|
|
|
|
|
|
|
|
Template Sequence |   |
I | I | N | T | A | Y | P | Y | D | P | R | Y | H | D | S | G | S | Q | R | W | D | E | V | T | K | V | G | E | K | H | G | Y | Y | R | G | I | D | S | Q | E | L | N | X | V | S | T | Y | T | Y | V | L | S | S | Y | P | D | X | K | L | A | L | E | I | A | E | K | X | K | K | X | A | . |
P | K | A | Y | L | X | Q | T |
Template Known Secondary structure |   |
 |  |  |
|
|
|
|
|
| T | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
| T | T |
| B | T | T | B |
|
| T | T | S |
| S | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | T | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . |
  |
  |   |
109 | 110 |
Predicted Secondary structure |   |
 |
|
Query SS confidence |   |
|
|
Query Sequence |   |
T | K |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
A | N |
Template Known Secondary structure |   |
S | S |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
159 | 160 |
  |